Synthetic antibodies against vegf and their uses

ABSTRACT

The invention provides novel synthetic antibodies directed against VEGF and uses thereof.

Throughout this application, various publications are referenced withinparentheses. The disclosures of these publications are herebyincorporated by reference herein in their entireties.

INCORPORATION BY REFERENCE OF MATERIAL SUBMITTED ELECTRONICALLY

Incorporated by reference in its entirety is a computer-readablenucleotide/amino acid sequence listing submitted concurrently herewithand identified as follows: 271,698 ASCH 11 file named“2021_11_18_Sequence_Listing”; created on Nov. 18, 2021.

BACKGROUND OF THE INVENTION

Age-related macular degeneration (AMD), is the leading cause of visionloss and blindness among people with age 60 and above. AMD is diagnosedas either dry (non-neovascular) or wet (neovascular) AMD. About 85 to 90percent of AMD patients are diagnosed with dry AMD. It is an early stageof disease which may result from the aging and thinning of maculartissues, resulting in deposition of pigment characterized by yellowspots called drusen in macula. Gradual central vision loss may occurwith dry macular degeneration but usually is not nearly as severe as wetAMD.

In a significant proportion of cases, dry AMD progresses to the moreadvanced and damaging form of the disease, wet AMD, leading to seriousvision loss. Wet AMD is characterized by the process of choroidalneovascularization which involves the formation of new blood vessels(angiogenesis) beneath the retina resulting in leakage of blood andfluid. This leakage causes permanent damage to light-sensitive retinalcells, resulting in vision loss. Vascular endothelial growth factor(VEGF) appears to play a pivotal role in the pathogenesis of choroidalneovascularization.

Treatment methods for wet AMI) include laser photocoagulation,photodynamic laser therapy with Visudyne®0.0 (Valeant PharmaceuticalsInternational) and anti-VEGF drugs, The discovery of anti-VEGF agentshas revolutionized treatment of the condition. Currently, the fouranti-VEGF agents either approved or in common use include pegaptanib(Macugen®, Valeant Pharmaceuticals International), ranibizumab(Lucentis®, Novartis and Roche), aflibercept or VEGF Trap-Eye (EYLEA®,Bayer and Regeneron Pharmaceuticals) and bevacizumab (Avastin®, Roche).

Anti-VEGF therapy may be used for treating wet AMD. However, currenttreatment involves giving frequent injections of the anti-VEGF drug intothe affected eye once a month for three months and then, monitoring thetreatment to give further injections. The frequent administration ofinjections leads to complications such as macular edema and stress inthe eyes of patients. If macular edema is prolonged, retinal thinning,scarring or retinal hole can eventually form. As such there remains anurgent need for improved drugs and methods for treating diseasesassociated with abnormal vascularization, such as wet AMD.

SUMMARY OF THE INVENTION

This invention encompasses novel anti-VEGF antibodies; andpolynucleotides comprising sequences encoding such novel anti-VEGFantibodies and compositions, including pharmaceutical compositions,comprising them and uses thereof.

The present invention also provides using the novel anti-VEGFantibodies, polynucleotides comprising sequences encoding such novelanti-VEGF antibodies and compositions, including pharmaceuticalcompositions in methods for inhibiting or treating diseases such as wetage related macular degeneration (AMD), diabetic maculopathy,proliferative diabetic retinopathy, macular edema in retinal veinocclusion (RVO), iris neovascularization, choroidal neovascularisationcaused by pathological myopia, retinopathy of maturity, neovascularglaucoma and cancer.

BRIEF DESCRIPTION OF THE FIGURES AND SEQUENCE LISTING

FIG. 1. Standard curve for determining Fab protein concentration basedon bovine serum albumin (BSA) as a reference standard and absorbance at595 nm using the Bradford protein assay showing linearity from 50 μg/mLto 500 μg/mL of BSA.

FIG. 2. Standard curve for quantifying amount of Fab with anti-VEGFactivity relative to known concentrations of anti-VEGF Fab (Lucentis®,Novartis and Roche) in an ELiSA format with immobilized human VEGF(hVEGF) 121 isoform and horse radish peroxidase (HRP)-conjugatedanti-kappa light chain antibody to detect soluble anti-VEGF Fab bound toimmobilized hVEGF and generate a colorimetric product with absorbance at450 nm.

FIG. 3. Competitive binding assay to determine the half maximalinhibitory concentration (IC50) of ranibizumab and Fab Clone #201 (Fab201) for hVEGF-121. The Fabs were incubated in two separate experimentswith various concentration of hVEGF-121 reported in the x-axis. Theunbound fraction of each Fab was captured with a hVEGF-121 coated plateand quantified with anti-Kappa-light-chain-HRP-conjugated antibody, asshown on the y-axis. 100 pM of each Fab was incubated with serialdilutions of hVEGF-121. Unbound Fabs were captured with immobilizedhVEGF-121 and detected with anti-Kappa-light-chain-HRP-conjugatedantibody. Kd estimated from the IC50 calculated from the data fittedwith a 5 parameter asymmetric model with Prism software are shown inTable 3.

FIG. 4a-b . CDR sequences of Fabs obtained from screening a naïvesynthetic antibody fragment (Fab) phage display library with recombinanthVEGF 121 isoform (A), and analysis of binding affinity usingimmobilized hVEGF and serial dilutions of soluble selected Fabs from thenaïve phage display library in a Fab-ELISA format (B). Amino acidsequences corresponding to the CDR according to Kabat are underlined (A)and titration by Fab-ELISA performed as follows: increasingconcentration of Fabs were incubated on wells coated with 2 ug/mL ofhVEGF-121. The bound Fabs were detected withanti-Kappa-light-chain-HRP-conjugated antibody (B). The dissociationconstant (Kd) was estimated from the 50% effective maximal concentration(EC50) and reported in the table below the line graph.

FIG. 5. A bar graph showing inhibition of binding of selected Fahs toimmobilized hVEGF in the presence (+) or the absence (−) of FLT, a VEGFnatural receptor, as a competitor in a competitive Fab-ELISA format,consistent with the 6 Fabs and FLT having overlapping binding sites onhVEGF. Wells of a microtiter plate were coated with 2 ug/mL of hVEGF.Washed wells were pre-incubated with either 500 nM FLT (R&D systems,catalog number 321-FL-250) in PBT (+) or PBT alone (−) for 1 hour.Sub-saturating amounts of Fabs were then added to either the FLT− or theFLT+ wells and plates were incubated for 15 minutes and washed. Theidentity of the Fab added to the well is identified on the y-axis. BoundFabs were then detected with an anti-Kappa-light-chain-HRP antibody. Thebackground subtracted OD 450 nm measurement is reported on the y-axis.

FIG. 6a-c . (A) CDR sequences of Fabs issued from the selection oflibraries based on FF0124-1 Fab sequence. Fabs are ranked by residualbinding observed in the competition-phage-ELISA when 10 nM of hVEGF waspreincubated with the Fab-phage. (B and C) Competitive Phage-ELISAresults for different clones with the sequence listed in panel A. Theresidual binding of the Fab-phage to immobilized hVEGF afterpreincubation with 1 nM (B) or 10 nM (C) of hVEGF is shown in percentageof binding without hVEGF preincubation. (*) CDR-H3 (defined by Kabat)also had “HAWYYGWAFDY” sequences in this group of clones. (**) CDR-H3(defined by Kabat) also had “HAWYYGWALDY” and “HAWYYGWAFDY” sequences inthis group of clones. The sequence and competitive phage ELISA for theparental Fab, FF0124-1, is shown for comparison. Amino acid sequencescorresponding to the CDR accordingly to Kabat are underlined. Amino acidsequences that are different from the parental Fab (FF0124-1) arehighlighted in bold.

FIG. 7a-b . (A) CDR sequences of Fabs issued from the selection oflibraries based on FF0158-C4 Fab sequence, yields in shake flasks andaffinity measurements by single point competitive ELISA and/orcompetitive ELISA (Kd—data and fit shown in B). Amino acid sequencescorresponding to the CDR accordingly to Kabat are underlined. Amino acidsequences different from the parental Fab (FF0158-C4) are highlighted inbold.

FIG. 8. CDR sequences of Fabs issued from the selection of librariesbased on FF0188-15 Fah sequence, production yields in shake flasks,affinity measurements by single point competitive ELISA and/orcompetitive ELISA and melting temperature (Tm). Amino acid sequencescorresponding to the CDR accordingly to Kabat are underlined. Amino acidsequences different from the parental Fab (FF0188-H5) are highlighted inbold.

FIG. 9a-c . Fabs CDR sequences, production yield and hVEGF bindingkinetic parameters are shown. (A) Table with CDR sequences, yields inshake flasks, hVEGF-121 binding off rates measured by SPR and meltingtemperature (Tm)—data shown in B. Amino acid sequences corresponding tothe CDR accordingly to Kabat are underlined Amino acid sequencesdifferent from the parental Fab (FF0117-A5) are highlighted in bold. (B)Thermal shift assay. (C) Example of full length sequences for FabFF03046-2.

FIG. 10. Inhibition of hVEGF-dependent human vascular endothelium cell(HUVEC) proliferation by anti-VEGF Fabs, FF03046-1, FF03046-2 andRanibizumab (Lucentis®; Novartis and Roche) in which recombinant humanVEGF 165 isoform is used to stimulate proliferation of HUVEC cells.2×10⁵ cells/ml of log-phase Huvec cells were added to serial dilutionsof Fabs pre-incubated with 260 pM of rhVEGF-165. Cells were thenincubated at 37° C. for 3 days before. The number of live cells wasassessed by resazurin staining.

FIG. 11. Competitive Fab-ELISA. 5 pM of hVEGF-165 was incubated withserial dilutions of anti-VEGF antibody as described in the figurelegend. Pre-formed hVEGF-165/anti-VEGF antibody complexes along with anyunbound hVEGF-165 in the binding solution are transferred into a 96-wellpolystyrene microplate coated with a monoclonal antibody specific forhuman VEGF, as provided in the Quantikine® ELISA Human VEGF Immunoassay(R&D Catalog Number: SVE00). hVEGF-165 bound to the plate is detectedusing a polyclonal anti-hVEGF antibody conjugated to horseradishperoxidase and tetramethylbenzidine as a chromagen to quantify hVEGF-165bound to the plate as provided in the Quantikine® assay kit. Kdcalculated from the data fitted with a 5 parameter asymmetric model withPrism software are shown in the table at the bottom of the figure.

FIG. 12. DNA and protein sequence of FF03092-1, the anti-VEGF Fc-Fabfusion.

FIG. 13. DNA and protein sequence of FF03077-4, the anti-VEGF Fc-scFvfusion. Single chain nucleic acid sequence: the scFv fusion sequence isunderlined; the Fc sequence is in italic; the linker between the Fc andthe scFv is underlined and in bold DNA coding sequences and amino acidsequences corresponding to the CDRs defined in accordance with IMGT® areshown in bold; DNA coding sequences and amino acid sequencescorresponding to CDR sequences of Fab FF03046-2 defined in accordancewith Kabat in the scFv are double underlined.

FIG. 14. Competitive ELISA. 5 pM of hVEGF-165 was incubated with serialdilutions of anti-VEGF antibody as described in the figure legend.Pre-formed hVEGF-165/anti-VEGF antibody complexes along with any unboundhVEGF-165 in the binding solution are transferred into a 96-wellpolystyrene microplate coated with a monoclonal antibody specific forhuman VEGF, as provided in the Quantikine® ELISA Human VEGF Immunoassay(R&D Catalog Number: SVE00). hVEGF-165 bound to the plate is detectedusing a polyclonal anti-hVEGF antibody conjugated to horseradishperoxidase and tetramethylbenzidine as a chromagen to quantify hVEGF-165bound to the plate as provided in the Quantikine® assay kit. Kdcalculated from the data fitted with a 5 parameter asymmetric model withPrism software are shown in the table at the bottom of the figure.

FIG. 15. DNA and protein sequence of FF03092-3, the anti-VEGF fulllength mature IgG1.

FIG. 16. DNA and protein sequence of anti-VEGF Fab #216 with analternative embodiment coding sequence from Example 3 indicated by adouble underline.

FIG. 17. Schematic representation of expression plasmid for anti-VEGFFab 201.

FIG. 18. Schematic representation of expression plasmid for anti-VEGFFab 216.

FIG. 19. Competitive binding assay to determine the half maximalinhibitory concentration (IC50) of Lucentis (Ranibizumab, Novartis andRoche) and Fab Clone #216 (Fab 216) for hVEGF-121. The Fabs wereincubated in two separate experiments with various concentration ofhVEGF-121 (Peprotech, Cat-100-20A) reported in the x-axis. The unboundfraction of each Fab was captured with a hVEGF-121 coated plate andquantified with anti-Kappa-light-chain-HRP-conjugated antibody, as shownon the y-axis. 100 pM of each Fab #216 was incubated with serialdilutions of hVEGF-121. Unbound Fabs were captured with immobilizedhVEGF-121 and detected with anti-Kappa-light-chain-HRP-conjugatedantibody. Kd estimated from the IC50 calculated from the data fittedwith a 5 parameter asymmetric model with Prism software are shown in thetable at the bottom of the FIG.

FIG. 20. Competitive-ELISA. 10 pM of hVEGF-165 was incubated with serialdilutions of anti-VEGF antibody, Fab 216. Pre-formed hVEGF-165/anti-VEGFantibody complexes along with any unbound hVEGF-165 in the bindingsolution are transferred into a 96-well polystyrene microplate coatedwith a monoclonal antibody specific for human VEGF, as provided in theQuantikine® ELISA Human VEGF Immunoassay (R&D Catalog Number: SVE00).hVEGF-165 bound to the plate is detected using a polyclonal anti-hVEGFantibody conjugated to horseradish peroxidase and tetramethylbenzidineas a chromagen to quantify hVEGF-165 bound to the plate as provided inthe Quantikine® assay kit. Kd was estimated using IC50 calculated fromthe data fitted with a 5 parameter asymmetric model with Prism softwareare shown in the table at the bottom of the figure.

FIG. 21. Fermentation data and expression yield for anti-VEGF Fab.

FIG. 22. Stability of drug product Fab 201 at 4° C.

FIG. 23. Alignment of immunoglobulin heavy chain variable region of Fab201 and Lucentis® (ranibizumab). Lines above and below the alignedimmunoglobulin heavy chain variable region sequences indicate thelocation of the CDRs of Fab 201 as defined by Kabat and IMGT®) methods,respectively, and given in SEQ ID NO: 16. Sequence of Lucentis®(ranibizumab) is obtained from GenBank Accession Number APZ76728.1 andAPZ76729.1.

FIG. 24. Alignment of immunoglobulin kappa light chain variable regionof Fab 201 and Lucentis® (ranibizumab). Lines above and below thealigned kappa light chain variable region sequences indicate thelocation of the CDRs of Fab201 as defined by Kabat and IMGT® methods,respectively, and given in SEQ ID NO: 16. Sequence of Lucentis®(ranibizumab) is obtained from GenBank Accession Number APZ76728.1 andAPZ76729.1.

SEQUENCES in the patent application Sequence Listing Nucleic acidsequence encoding an Ig heavy chain SEQ ID NO: 1 fragment of FabFF03046-2 antibody comprising a variable region with an optimized humanframework and affinity matured CDR-H1, -H2 & -H3 against mouse and humanVEGF and a constant region with a CH1 domain Amino acid sequence ofheavy chain variable domain SEQ ID NO: 2 encoded by SEQ ID NO: 1 Nucleicacid sequence encoding an Ig Sight chain of a SEQ ID NO: 3 synthetichumanized anti-VEGF Fab antibody fragment, Fab FF03046-2, comprising avariable region with an optimized human framework and affinity maturedCDR- L1, L2 and L3 against mouse and human VEGF and a kappa light chainconstant region Amino acid sequence of light chain variable domain SEQID NO: 4 encoded by SEQ ID NO: 3 Nucleic acid sequence encoding asynthetic humanized SEQ ID NO: 5 antibody FF03092-1 heavy chain fusionused to form a humanized anti-VEGF Fc-Fab fusion comprising an aminoterminal humanized immunoglobulin Fc fragment fused to a humanized Fabfragment Amino acid sequence of a synthetic humanized antibody SEQ IDNO: 6 FF03092-1 heavy chain fusion encoded by SEQ ID NO: 5 Nucleic acidsequence encoding a synthetic humanized SEQ ID NO: 7 antibody FF03092-1kappa light chain used to form a humanized anti-VEGF Fc-Fab fusioncomprising an amino ::terminal humanized immunoglobulin Fc fragmentfused to a humanized Fab fragment Amino acid sequence of a synthetichumanized antibody SEQ ID NO: 8 FF03092-1 kappa light chain encoded bySEQ ID NO: 7 Nucleic acid sequence encoding a synthetic humanized SEQ IDNO: 9 antibody FF03077-4 comprising an amino-terminal humanized Fcfragment fused to a humanized anti-VEGF single chain Fv (scFv) directedagainst human and mouse VEGF Amino acid sequence of a synthetichumanized antibody SEQ ID NO: 10 FF03077-4 encoded by SEQ ID NO: 9,comprising an amino-terminal humanized Fc fragment fused to a humanizedanti-VEGF single chain Fv (scFv) directed against human and mouse VEGFNucleic Acid sequence encoding a synthetic humanized SEQ ID NO: 11anti-VEGF full length mature IgG1 antibody, FF03092-3, heavy chaincomprising an optimized human framework and affinity matured CDR-H1,CDR-H2 and CDR-H3 directed against mouse and human VEGF Amino acidsequence of a synthetic humanized anti-VEGF SEQ ID NO: 12 full lengthmature igG1 antibody, FF03092-3, heavy chain encoded by SEQ ID NO: 11,comprising an optimized human framework and affinity matured CDR-H1,CDR-H2 and CDR-H3 directed against mouse and human VEGF Nucleic acidsequence of a synthetic humanized full length SEQ ID NO: 13 mature IgG1antibody, FF03092-3, kappa light chain comprising an optimized humanframework and affinity matured CDR-L1, CDR-L2 and CDR-L3 directedagainst mouse and human VEGF Amino acid sequence of a synthetichumanized full length SEQ ID NO: 14 mature IgG1 antibody, FF03092-3,kappa light chain encoded by SEQ ID NO: 13, comprising an optimizedhuman framework and affinity matured CDR-L1, CDR-L2 and CDR-L3 directedagainst mouse and human VEGF Nucleic acid sequence of E. coli Pho Apromoter SEQ ID NO: 15 Nucleic acid sequence enoding a synthetichumanized Fab SEQ ID NO: 16 anti-VEGF antibody fragment withamino-terminal secretory signal along with non-coding intercistronicregion directed against mouse and human VEGF present in expressionplasmid Clone #201 Amino acid sequence of an Ig kappa light chain of aSEQ ID NO: 17 synthetic humanized anti-VEGF Fab antibody fragmentdirected against mouse and human VEGF along with amino-terminalsecretory signal encoded by expression plasmid Clone #201 Amino acidsequence of an Ig heavy chain fragment of a SEQ ID NO: 18 synthetichumanized anti-VEGF Fab antibody fragment directed against mouse andhuman VEGF along with amino-terminal secretory signal encoded byexpression plasmid Clone #201 Nucleic acid sequence of the ribosomal RNAgene SEQ ID NO: 19 terminator used to terminate transcription of Igcoding sequence in expression plasmid Clone #201 Nucleic acid sequenceof pBR322 (GenBank Accession No: SEQ ID NO: 20 J01749.1) from nucleotideposition 1353 to 4361 in which the tetracycline resistance gene ofpBR322 has been deleted, which is used to construct expression plasmidClone #201 Variant 201 SEQ ID NO: 21 Variant 202 SEQ ID NO: 22 Variant203 SEQ ID NO: 23 Variant 204 SEQ ID NO: 24 Variant 205 SEQ ID NO: 25Variant 206 SEQ ID NO: 26 Variant 207 SEQ ID NO: 27 Variant 208 SEQ IDNO: 28 Variant 209 SEQ ID NO: 29 Variant 212 SEQ ID NO: 30 Variant 213SEQ ID NO: 31 Variant 214 SEQ ID NO: 32 Variant 215 SEQ ID NO: 33Variant 216 SEQ ID NO: 34 Variant 217 SEQ ID NO: 35 Variant 218 SEQ IDNO: 36 Variant 219 SEQ ID NO: 37 Variant 220 SEQ ID NO: 38 FF0124-1F2078 SEQ ID NO: 39 FIG. 4 FF0124-2 F2083 SEQ ID NO: 40 FIG. 4 FF0124-3F2086 SEQ ID NO: 41 FIG. 4 FF0124-4 F2088 SEQ ID NO: 42 FIG. 4 FF0124-5F2091 SEQ ID NO: 43 FIG. 4 FF0124-6 F2094 SEQ ID NO: 44 FIG. 4 FF0124-7F2116 SEQ ID NO: 45 FIG. 4 FF0158-C4 SEQ ID NO: 46 FIG. 6 FF0158-F11 SEQID NO: 47 FIG. 6 FF0158-C11 SEQ ID NO: 48 FIG. 6 FF0158-F2 SEQ ID NO: 49FIG. 6 FF0158-E2 SEQ ID NO: 50 FIG. 6 FF0158-C3 SEQ ID NO: 51 FIG. 6FF0158-B10 SEQ ID NO: 52 FIG. 6 FF0158-C2 SEQ ID NO: 53 FIG. 6 FF0128-1SEQ ID NO: 54 FIG. 6 FF0158-C4 (2) SEQ ID NO: 84 FIG. 7 FF0187-B3 SEQ IDNO: 85 FIG. 7 FF0187-C1 SEQ ID NO: 86 FIG. 7 FF0187-A12 SEQ ID NO: 87FIG. 7 FF0187-H3 SEQ ID NO: 88 FIG. 7 FF0188-H5 SEQ ID NO: 89 FIG. 7FF0188-B10 SEQ ID NO: 90 FIG. 7 FF0188-F12 SEQ ID NO: 91 FIG. 7FF0188-B6 SEQ ID NO: 92 FIG. 7 FF0188-A2 SEQ ID NO: 93 FIG. 7 FF0188-A9SEQ ID NO: 94 FIG. 7 FF0117-A3 SEQ ID NO: 55 FIG. 8 FF0U7-A5 SEQ ID NO:56 FIG. 8 FF0117-A8 SEQ ID NO: 57 FIG. 8 FF0117-A10 SEQ ID NO: 58 FIG. 8FF0117-A11 SEQ ID NO: 59 FIG. 8 FF0117-A12 SEQ ID NO: 60 FIG. 8FF0117-B5 SEQ ID NO: 61 FIG. 8 FF0117-B9 SEQ ID NO: 62 FIG. 8 FF0117-B11SEQ ID NO: 63 FIG. 8 FF0188-H5(2) SEQ ID NO: 64 FIG. 8 FF03033-1 SEQ IDNO: 65 FIG. 9A FF03033-2 SEQ ID NO: 66 FIG. 9A FF03033-3 SEQ ID NO: 67FIG. 9A FF03033-4 SEQ ID NO: 68 FIG. 9A FF03033-5 SEQ ID NO: 69 FIG. 9AFF03033-6 SEQ ID NO: 70 FIG. 9A FF03033-8 SEQ ID NO: 71 FIG. 9AFF03046-2 SEQ ID NO: 72 FIG. 9A FF0117-A5 (2) SEQ ID NO: 73 FIG. 9AFF03077-4 anti-VEGF Fc-scFv fusion SEQ ID NO: 74 Single chain nucleicacid sequence: FIG. 13 FF03077-4 anti-VEGF Fc-scFv fusion SEQ ID NO: 75Single chain amino acid sequence: FIG. 13 FIG. 15 Anti-VEGF Fab 216 SEQID NO: 76 Light chain (hK) amino acid sequence: FIG. 16 Anti-VEGF Fab216 SEQ ID NO: 77 Light chain (hK) nucleic acid sequence: FIG. 16Anti-VEGF Fab 216 SEQ ID NO: 78 Heavy chain amino acid sequence: FIG. 16Anti-VEGF Fab 216 SEQ ID NO: 79 Heavy chain Nucleic acid sequence: FIG.16 Lucentis (Ranibizumab) Heavy Chain SEQ ID NO: 80 (GenBank AccessionNumber: APZ76728.1) FIG. 23 Fab 201 Heavy Chain SEQ ID NO: 81 FIG. 23Lucentis (Ranibizumab) Light Chain SEQ ID NO: 82 FIG. 24 (GenBankAccession Number: APZ76729.1) Fab 201 Light Chain SEQ ID NO: 83 FIG. 24

DETAILED DESCRIPTION OF THE INVENTION Definitions

Unless defined otherwise, all technical and scientific terms used hereinhave the same meaning as is commonly understood by one of ordinary skillin the art to which relevant embodiments of the invention belong.

It must be noted that, as used herein and in the appended claims, thesingular forms “a,” “or,” and “the” include plural referents unless thecontext clearly dictates otherwise. Thus, for example, “an antibody”includes a plurality of such antibodies. Also, as used herein, “and/or”refers to and encompasses any and all possible combinations of one ormore of the listed items, as well as the lack of combinations wheninterpreted in the alternative (“or”).

As used herein, “at least one” is intended to mean “one or more” of thelisted elements.

As used herein, the term “substantially free” includes being free of agiven substance or cell type or nearly free of that substance or celltype, e.g. having less than about 1% of the given substance or celltype.

As used herein, the term vascular endothelial growth factor “VEGF”refers, unless specifically or contextually indicated otherwise, to anynative, variant or synthetic VEGF polypeptide, or fragment thereof, ofthe VEGF family which comprises seven members: VEGF-A, VEGF-B, VEGF-C,VEGF-D, VEGF-E, VEGF-G and PLGF, wherein all members have a common VEGFhomology domain composed of a cysteine knot motif with eight invariantcysteine residues involved in inter- and intramolecular disulfide bondsat one end of a conserved central four stranded β-sheet within eachmonomer, which dimerize in an antiparallel, side-by-side orientation,and participate in angiogenesis (reviewed in Hoeben, A., et al. (2004)Vascular endothelial growth factor and angiogenesis. Pharmacol. Rev. 56,549-580; see FIG. 1 of Hoeben et al. (2004) for a 3D structure ofcysteine knot motif with inter- and intramolecular disulfide bonds).Each member within the VEGF family is encoded by a distinct gene;however, each member may comprise a number of different isoforms due toalternative splicing or proteolysis.

In a preferred embodiment, VEGF is VEGF-A and its isoforms that play arole in promoting or maintaining angiogenesis. For example, alternativesplicing of the primary transcript of the VEGF-A gene, also referred toin the literature as VEGF without reference to “-A”, produces differentVEGF-A mRNAs encoding different VEGF-A isoforms, indicated often simplyas VEGF followed by a number, with different isoforms having apro-angiogenic or anti-angiogenic property depending on the presence ofan alternatively spliced exon 8a or 8b of the VEGF-A gene. Of particularinterests are VEGF-A isoforms obtained from translation of thealternative spliced exon 8a, which are generally pro-angiogenic, incontrast to those with exon 8b, which are generally anti-angiogenic. Inhumans, the exon 8a-containing VEGF-A isoforms from alternative splicingcomprise: VEGF-A₁₂₁ (also, often called VEGF₁₂₁), VEGF-A₁₄₅ (also, oftencalled VEGF₁₄₅), VEGF-A₁₄₈ (also, often called VEGF₁₄₈), VEGF-A₁₆₅(also, often called VEGF₁₆₅), VEGF-A₁₈₃ (also, often called VEGF₁₈₃),VEGF-A₁₈₉ (also, often called VEGF₁₈₉) and VEGF-A₂₀₆ (also, often calledVEGF₂₀₆) (Nowak, D. G., et al. (2008) Expression of pro- andanti-angiogenic isoforms of VEGF is differentially regulated by splicingand growth factors. J. Cell Sci. 121, 3487-3495). The number followingVEGF in each isoform of VEGF-A refers to the number of amino acids,after signal sequence cleavage following secretion; this number may be asubscript or inline, such as VEGF₁₂₁ or VEGF₁₂₁, respectively. Inrodents, such as mouse, orthologs of these VEGF isoforms contain oneless amino acid. VEGF is normally a homodimeric glycoprotein with itsisoforms differing in their abilities to bind heparin. The larger highlybasic VEGF₁₈₉ and VEGF₂₀₆ isoforms bind tightly to cell-surfaceheparin-containing proteoglycans in the extracellular matrix (ECM);whereas, the acidic VEGF₁₂₁ isoform lacks ability to bind heparin and isfreely diffusible. VEGF₁₆s isoform has intermediate properties with asignificant fraction bound to heparin and ECM. In addition to VEGFisoforms produced by alternative splicing, the ECM-bound VEGF isoformsmay undergo proteolysis to generate a bioactive fragment with highmitogenic activity such as VEGF₁₁₀ or VEGF100 from proteolysis ofVEGF165 or VEGF189 of human VEGF-A isoforms (Ferrara, N., Gerber, H.-P.,and LeCouter, J. (2003) The biology of VEGF and its receptors. NatureMedicine 9, 669-676; also, see Hoeben, A., et al. (2004) above). Inaddition to VEGF₁₀₀, any fragment of VEGF protein derived from the VEGFfamily of genes, either through natural proteolysis or man made, may beconsidered as VEGF so long as an antibody may be raised against or bedirected to it, and the VEGF protein fragment has a role in promoting ormaintaining angiogenesis, macular degeneration, tumor or human disease.

In addition to isolating VEGF protein from a subject or cultured cells,VEGF protein may be produced by recombinant DNA methods. For example,VEGF protein for any VEGF isoform or fragment or variant may be producedin a bacterium, a yeast, an insect cell or a mammalian cell or beproduced in vitro in cell-free translation extract or coupledtranscription-translation extract, as is known in the art. In the caseof production in a bacterial cell, the resulting recombinant VEGFprotein produced in bacterium can have the same primary amino acidsequence but may lack post translational modification such asglycosylation unlike VEGF protein isolated from mammalian cells.Nevertheless, the present disclosure encompasses VEGF produced in abacterial cell, produced in vitro, such as using an in vitro cell-freetranslation system or coupled transcription-translation system, orproduced by recombinant methods, in addition to VEGF isolated from anatural source. A VEGF antigen may be naturally occurring, recombinantor synthetic VEGF molecule. The VEGF antigen may be present on an intactVEGF protein, VEGF isoform, a fragment of VEGF or a peptide with asequence derived from a portion of VEGF.

As used herein, “wild type VEGF sequence” generally refers to a primaryamino acid sequence found in a naturally occurring VEGF isoform orderived from translation of the VEGF mRNA following processing of theprimary VEGF gene transcript in a mammalian cell or derived from thetranslation of any VEGF cDNA. The VEGF cDNA may be obtained, forexample, by reverse transcription of polysomal VEGF mRNA from amammalian cell, such as a mouse or human cell.

As used herein, “antibody” includes monoclonal antibodies (e.g., fulllength or intact monoclonal antibodies), polyclonal antibodies,multivalent antibodies (e.g., antibodies with more than one antigenbinding site of the same specificity so as to permit association withmore than one antigen depending on the valency and increased avidityobserved for example for bivalent IgG antibody versus its monovalent Fabantibody fragment), multispecific antibodies (e.g., bispecificantibodies so long as they exhibit the desired biological activity) andmay also include certain antibody fragments (as described in greaterdetail herein). An antibody can be human, humanized, affinity maturedand/or synthetic. An antibody may be produced by any method known in theart, such as, for example in vivo in an animal, in tissue or cellculture, or in vitro protein synthesis systems by enzymatic and/orchemical systhesis methods. Recombinant DNA methods may be used in theproduction of an antibody, and the resulting antibody may be consideredto be a recombinant antibody. A recombinant antibody may be producedfree of animal products such as produced in a bacterium. An antibody orits fragment may be displayed on the surface of a bacteriophage.

“Antibody fragment” or “antibody fragments” are only a portion of anantibody, wherein the portion retains at least one, preferably many orall, of the functions normally associated with that portion when presentin an intact antibody. Examples of antibody fragments include Fab, Fab′,F(ab′)2, and Fv fragments; diabodies; linear antibodies; single-chainantibody molecules including single-chain Fv (scFv) antibody molecule;multivalent antibodies formed from multiple copies of the same antibodyfragment with the same specificity; and multispecific antibodies formedfrom antibody fragments.

A synthetic human anti-VEGF antibody includes an “affinity matured”antibody which includes one or more changes in one or more hypervariableregions or complementarity determining regions (CDRs) thereof, whichresult in an improvement in the affinity of the antibody for VEGF,compared to a parent antibody which does not possess those changes. CDRsfound in the variable region of an antibody may be defined by Kabatmethod or IMGT method (Martin, A. C. R. (1996) Accessing the KabatAntibody Sequence Database by Computer PROTEINS: Structure. Function andGenetics 25: 130-133; Johnson, G. and Wu, T. T. (2004) The KabatDatabase and a Bioinformatics Example. Methods in Molecular Biology 248:11-25; Kabat, E. A., Wu, T. T., Perry, H., Gottesman, K., and Foeller,C. (1991) Sequences of Proteins of Immunological Interest, 5th ed., NIHPublication No. 91-3242, Bethesda, Md.; MacCallum, R. M., Martin, A. C.R. and Thornton, J. T. (1996) Antibody-antigen interactions: Contactanalysis and binding site topography. J. Mol. Biol. 262, 732-745;Lefranc, M.-P., Pommié, C., Ruiz, M., Giudicelli, V., Foulquier, E.,Truong, L., Thouvenin-Contet, V. and Lefranc, G. (2003) IMGT uniquenumbering for immunoglobulin and T cell receptor variable domains and Igsuperfamily V-like domains. Dev. Comp. Immunol. 27: 55-77; and Lefranc,M.-P. (2005) IMGT, the international ImMunoGeneTics information System®.Nucleic Acids Res. 33: D593-D597; Lefranc, M.-P. et al. (2009) IMGT®,the international ImMunoGeneTics information System®. Nucleic Acids Res.37: D1006-D1012). The specificity of an antibody may be defined ordescribed by a set of CDRs which may be defined by a number of methodsincluding Kabat or IMGT® method.

The antigen-binding region of an antibody may include an antigen-bindingsite formed by the CDRs of the light chain variable region and heavychain variable region.

A disorder or disease is a condition that would benefit from treatmentwith anti-VEGF antibodies/compositions or method of the invention. Thisincludes chronic and acute disorders or diseases including thosepathological conditions which predispose the mammal to the disorder inquestion. Non-limiting examples of disorders to be treated hereininclude cell proliferative disorders. The cell proliferative disordermay include a disease such as wet age related macular degeneration,diabetic maculopathy, proliferative diabetic retinopathy, macular edemain retinal vein occlusion (RVO), iris neovascularization, choroidalneovascularisation caused by pathological myopia, retinopathy ofmaturity, neovascular glaucoma, diabetic retinopathy, retinalneovascularization, pars plana vitrectomy (PPV), diabetic macular edema(DME) or cancer.

As used herein, “treating” means using a therapy to ameliorate a diseaseor disorder or one or more of the biological manifestations of thedisease or disorder; to directly or indirectly interfere with (a) one ormore points in the biological cascade that leads to, or is responsiblefor, the disease or disorder or (b) one or more of the biologicalmanifestations of the disease or disorder; to alleviate one or more ofthe symptoms, effects or side effects associated with the disease ordisorder or one or more of the symptoms or disorder or treatmentthereof; or to slow the progression of the disease or disorder or one ormore of the biological manifestations of the disease or disorder.Treatment includes eliciting a clinically significant response.Desirable effects of treatment include preventing occurrence orrecurrence of disease, alleviation of symptoms, diminishment of anydirect or indirect pathological consequences of the disease, preventingmetastasis, decreasing the rate of disease progression, amelioration orpalliation of the disease state, and remission or improved prognosis. Insome embodiments, antibodies of the invention are used to delaydevelopment of a disease or disorder. For example, treatment of an eyecondition may improve the symptoms of the condition, reduce the severityof a condition, alter the course of condition's progression and/orimprove the basic condition. Treatment may also include improvingquality of life for a subject afflicted with the disease or disorder(e.g., a subject afflicted with a cancer may receive a lower dose of ananti-cancer drug that cause side-effects when the subject is immunizedwith a composition of the invention described herein). Throughout thespecification, compositions of the invention and methods for the usethereof are provided and are chosen to provide suitable treatment forsubjects in need thereof.

A “subject” may be a vertebrate, preferably a mammal, and morepreferably a human. Mammals include, but are not limited to, farmanimals (such as cows, sheeps, and goats), sport animals, pets (such ascats, dogs and horses), primates (such as, monkeys, gorillas andchimpanzees), mice and rats.

As used herein, an “effective amount” refers to an amount effective, atdosages and for periods of time necessary, to achieve the desiredtherapeutic or prophylactic result.

In order that the invention herein described may be more fullyunderstood the following description is set forth.

Compositions of the Invention and Methods of Making Same

This invention encompasses novel anti-VEGF antibodies; andpolynucleotides comprising sequences encoding such novel anti-VEGFantibodies and compositions, including pharmaceutical compositions,comprising them. The terms “pharmaceutical formulations”,“pharmaceutical compositions” and “dosage forms” are usedinterchangeably herein and refer to a composition containing the activeingredient(s) of the invention in a form suitable for administration toa subject.

As used herein, compositions comprise one or more antibodies of theinvention that bind to VEGF, and/or one or more polynucleotidescomprising sequences encoding one or more antibodies that bind to VEGF.These compositions may further comprise suitable carriers, such aspharmaceutically acceptable excipients, including buffers, which arewell known in the art.

Merely by way of example, an antibody is a protein that may take theshape of a Y which may be created by joining two immunoglobulin lightchains and two immunoglobulin heavy chains, wherein one light chainassociates with one heavy chain to form one arm of the protein. The twoarms join through the association of one heavy chain to the other.Typically, each arm of the antibody recognizes the same antigen andbinds an epitope on the antigen through the antigen binding site formedby the variable region of the associated light and heavy chain. Theportion of the variable region of the light and heavy chain that bind tothe epitope are called hypervariable regions or “complementaritydetermining regions (CDRs).” An antibody's specificity for a particularantigen depends on the amino acid sequences of the hypervariable regionor CDRs, which show greatest variability between antibodies of differentbinding specificities. The remaining non-hypervariable regions ornon-CDRs called the framework regions (FRs). For example, there may bethree CDRs from amino-to-carboxyl terminal of a variable region calledCDR1-3 for each light chain and each heavy chain, which are separated byfour FRs, namely, FR1-4. To distinguish the light chain CDR from heavychain CDR, the light chain CDR1-3 are designated CDRL1-CDRL3, oralternatively CDR-L1 to CDR-L3. Similarly, the heavy chain CDR1-3 aredesignated CDRH1-CDRH3 or CDR-H1 to CDR-H3. The four FRs in the lightchain variable region are designated FRL1-FRL4 or FR-L1 to FR-L4.Further, the four FRs in the heavy chain variable region are designedFRH1-FRH4 or FR-H1 to FR-H4. Accordingly, the typical variable region isformed by attaching from the amino-to-carboxyl terminus for the lightchain in the order FRL1-CDRL1-FRL2-CDRL2-FRL3-CDRL3-FRL4. Similarly, theheavy chain is formed in the orderFRH1-CDRH1-FRH2-CDRH2-FRH3-CDRH3-FRH4. The light chain variable regionis followed by a kappa or lambda light chain constant region, whichcompletes the light chain. Whereas, the heavy chain variable region isjoined at its C-terminus to constant regions, CH1, CH2 and CH3 alongwith a hinge region between CH1 and CH2 with cysteine residue(s) thatparticipate in an interstrand crosslink with the hinge region of thesecond heavy chain. Sequence of the heavy chain constant regiondetermines the class of immunoglobulin (IgA, IgD, IgE, IgG, or IgM) andwithin each class determines the subclass (e.g., for IgG class, theIgG1, IgG2, IgG3 or IgG4 subclass).

The complementarity determining region (CDR) or hypervariable region ofan immunoglobulin light and heavy chains may be defined based onsequence comparison as by Elvin A. Kabat and colleagues (Kabat, E. A.,Wu, T. T., Perry, H. M., Gottesman, K. S. and Foeller, C. (1991)Sequences of Proteins of Immunological Interest, Volumes 1-3. 5^(th)edition. NIH Publication No. 91-3242 (ISBN: 094137565X, 9780941375658),with non-CDR sequences designed as specific FRs, depending on therelationship to each CDR. Alternatively, another method foridentification of CDRs in immunoglobulin was developed by Marie-PauleLefranc and colleagues to produce the IMGT® charts and methods foridentifying CDRs (Lefranc, M.-P., et al. (1999) IMGT, the internationalImMunoGeneTics database. Nucl. Acids Res. 27, 209-212; Lefranc, M.-P.,et al. (2015) IMGT®, the international ImMunoGeneTics® informationsystem 25 years on. Nucl. Acids Res. 43, D413-D422). Both the Kabatmethod and IMGT method for identifying CDRs are used herein. Bothmethods produce either identical CDR sequences or overlaps between CDRsequences or one CDR sequence contained in its entirety with the CDRsequence determined for the corresponding CDR by the other method. Incases where the CDR sequences identified by both methods failed to yieldsame length or are overlapping, the framework regions (by default theregion outside of the CDR or between CDRs in the variable region) arenot identical in size or similarly will have overlapping sequences.

In one embodiment, the invention provides an isolated anti-VEGF antibodyor portion or variant thereof having a heavy chain variable domaincomprising the following hypervariable region or complementaritydetermining region (CDR) amino acid sequences: CDRH1 comprisinghistidine at amino acid position 31 to histidine at amino acid position35 (SEQ ID NO: 1), CDRH2 comprising tyrosine at amino acid position 50to glycine at amino acid position 66 (SEQ ID NO: 1) and CDRH3 comprisinghistidine at amino acid position 99 to tyrosine at amino acid position109 (SEQ ID NO: 1).

A variant of an anti-VEGF antibody of the invention may includeantibodies that comprise an amino acid sequence wherein one or moreamino acid residues are different relative to the amino acid sequencesof any of the Y variants disclosed herein, (e.g., see Example 3 andFIGS. 9C and 16) e.g., changes due to amino acid residues that areinserted into, deleted from and/or substituted in the framework regionbut no amino acid residues are inserted into, deleted from and/orsubstituted in the the CDR regions (e.g. either as defined by Kabatnumbering or IMGT numbering; or any other CDR identification system suchas Chothia nomenclature). Variants include antibody fragments, such asFab fragment and single chain Fv (scFv) fragment. Variants may furtherinclude fusion proteins, such as e.g., in FIGS. 12 and 13. Variants andantibodies of disclosed herein may be produced by recombination DNAmethods.

A portion of an isolated antibody of the invention includes usefulimmunologically functional fragments or provides specificity of bindingan antigen or epitope on an antigen (e.g. recognizes and binds a VEGF)such as a CDR region, a variable domain of a heavy and/or light chain ora portion of an antibody chain that binds a VEGF. It would be clear toone skilled in the art that the antibodies of the invention can becamelized.

For example, an isolated antibody or portion or variant thereof is onewhich has been separated and/or recovered from its productionenvironment. The production environment may be cell-based, e.g., cells,or may be cell free, e.g., in vitro translation or coupledtranscription-translation cell-free system. In preferred embodiments,the antibody will be purified (a) to greater than about 95% by weight ofantibody as determined by, e.g., the Lowry method, and most preferablymore than about 99% by weight or (b) to homogeneity by SDS-PAGE underreducing or nonreducing conditions. As used herein, the term “about”when used before a numerical designation, e.g., temperature, time,amount, concentration, and such other, including a range, indicatesapproximations which may vary by (+) or (−) 10%, 5% or 1%.

In another embodiment, the invention provides an isolated anti-VEGFantibody or portion or variant thereof having a light chain variabledomain comprising the following hypervariable region or complementaritydetermining region (CDR) amino acid sequences: CDRL1 comprising arginineat amino acid position 24 to alanine at amino acid position 34 (SEQ IDNO: 3), CDRL2 comprising lysine at amino acid position 50 to alanine atamino acid position 56 (SEQ ID NO: 3), and CDRL3 comprising glutamine atamino acid position 89 to threonine at amino acid position 97 (SEQ IDNO: 3).

In yet an additional embodiment, the anti-VEGF antibody or portionthereof may further comprise a heavy chain variable domain comprisingthe following CDR amino acid sequences defined in accordance with IMGTnumbering shown in bold in FIG. 16: CDRH1 comprising amino acidsequences GFDLDHYS, CDRH2 comprising amino acid sequences IYPSYGYT andCDRH3 comprising amino acid sequences ARHAWYYGWGLDY; and a light chainvariable domain comprising the following CDR amino acid sequencesdefined in accordance with IMGT numbering shown in bold in FIG. 16:CDRL1 comprising amino acid sequences QAAYGR, CDRL2 comprising aminoacid sequences KAS and CDRL3 comprising amino acid sequences QQRGWYLFT

An additional embodiment provides the anti-VEGF antibody or portionthereof further comprising a heavy chain variable domain comprising thefollowing CDR amino acid sequences: CDRH1 comprising histidine at aminoacid position 31 to histidine at amino acid position 35 (SEQ ID NO: 1),CDRH2 comprising tyrosine at amino acid position 50 to glycine at aminoacid position 66 (SEQ ID NO: 1) and CDRH3 comprising histidine at aminoacid position 99 to tyrosine at amino acid position 109 (SEQ ID NO: 1).

The invention provides a humanized anti-VEGF antibody or portionthereof. The anti-VEGF antibody of the invention inhibits VEGF-inducedangiogenesis in vivo.

Also, the invention provides synthetic human anti-VEGF antibodies orportion or variant thereof. In one embodiment, it comprises a lightchain variable domain having the following hypervariable region orcomplementarity determining region (CDR) amino acid sequences: a CDRL1which comprises arginine at amino acid position 24 to alanine at aminoacid position 34 (SEQ ID NO: 3) or a portion thereof, a CDRL2 whichcomprises lysine at amino acid position 50 to alanine at amino acidposition 56 (SEQ ID NO: 3) or a portion thereof, and a CDRL3 whichcomprises glutamine at amino acid position 89 to threonine at amino acidposition 97 (SEQ ID NO: 3) or a portion thereof; and a heavy chainvariable domain having the following hypervariable region orcomplementarity determining region (CDR) amino acid sequences: a CDRH1which comprises histidine at amino acid position 31 to histidine atamino acid position 35 (SEQ ID NO: 1) or a portion thereof, a CDRH2which comprises tyrosine at amino acid position 50 to glycine at aminoacid position 66 (SEQ ID NO: 1) or a portion thereof and a CDRH3 whichcomprises histidine at amino acid position 99 to tyrosine at amino acidposition 109 (SEQ ID NO: 1) or a portion thereof.

Examples of anti-VEGF antibodies of the invention include, but are notlimited to, variants 201, 202, 203, 204, 205, 206, 207, 208, 209, 212,213, 214, 215, 216, 217, 218, 219 and 220 as shown in SEQ ID NOS: 21-28,respectively.

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a heavy chain framework region (FR) 1, FRH1, amino sequencecomprising glutamic acid at amino acid position 1 to phenylalanine atamino acid position 30 (SEQ ID NO: 1).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a heavy chain framework region (FR) 2. FRH2, amino sequencecomprising tryptophan at amino acid position 36 to alanine at amino acidposition 49 (SEQ ID NO: 1). In yet an additional embodiment, theanti-VEGF antibody may further comprise a heavy chain framework region(FR) 3, FRH3, amino sequence comprising arginine at amino acid position67 to arginine at amino acid position 98 (SEQ ID NO: 1).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a heavy chain framework region (FR) 4, FRH4, amino sequencecomprising tryptophan at amino acid position 110 to serine at amino acidposition 120 (SEQ ID NO: 1).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise the following heavy chain framework region (FR) amino acidsequences: FRH1 comprising glutamic acid at amino acid position 1 tophenylalanine at amino acid position 30 (SEQ ID NO: 1), FRH2 comprisingtryptophan at amino acid position 36 to alanine at amino acid position49 (SEQ ID NO: 1), FRH3 comprising arginine at amino acid position 67 toarginine at amino acid position 98 (SEQ ID NO: 1) and FRH4 comprisingtryptophan at amino acid position 110 to serine at amino acid position120 (SEQ ID NO: 1).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a light chain framework region (FR) 1, FRL1, amino sequencecomprising aspartic acid at amino acid position 1 to cysteine at aminoacid position 23 (SEQ ID NO: 3).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a light chain framework region (FR) 2, FRL2, amino sequencecomprising tryptophan at amino acid position to tyrosine at amino acidposition 49 (SEQ ID NO: 3).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a light chain framework region (FR) 3, FRL3, amino sequencecomprising glycine at amino acid position 57 to cysteine at amino acidposition 88 (SEQ ID NO: 3).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise a light chain framework region (FR) 4, FRL4, amino sequencecomprising phenylalanine at amino acid position 98 to lysine at aminoacid position 107 (SEQ ID NO: 3).

In yet an additional embodiment, the anti-VEGF antibody may furthercomprise the following light chain framework region (FR) amino acidsequences: FRL1 comprising aspartic acid at amino acid position 1 tocysteine at amino acid position 23 (SEQ ID NO: 3), FRL2 comprisingtryptophan at amino acid position 35 to tyrosine at amino acid position49 (SEQ ID NO: 3), FRL3 comprising glycine at amino acid position 57 tocysteine at amino acid position 88 (SEQ ID NO: 3) and FRL4 comprisingphenylalanine at amino acid position 98 to lysine at amino acid position107 (SEQ ID NO: 3).

In yet an additional embodiment, the anti-VEGF antibody or portion orvariant thereof may further comprise: (c) a light chain variable domainhaving the following framework region amino acid sequences: a FRL1 whichcomprises aspartic acid at amino acid position 1 to cysteine at aminoacid position 23 (SEQ ID NO: 3) or a portion thereof, FRL2 whichcomprises tryptophan at amino acid position 35 to tyrosine at amino acidposition 49 (SEQ ID NO: 3) or a portion thereof, FRL3 which comprisesglycine at amino acid position 57 to cysteine at amino acid position 88(SEQ ID NO: 3) or a portion thereof, and FRL4 which comprisesphenylalanine at amino acid position 98 to lysine at amino acid position107 (SEQ ID NO: 3) or a portion thereof; and (d) a heavy chain variabledomain having the following framework region amino acid sequences: aFRH1 which comprises glutamic acid at amino acid position 1 tophenylalanine at amino acid position 30 (SEQ ID NO: 1) or a portionthereof, FRH2 which comprises tryptophan at amino acid position 36 toalanine at amino acid position 49 (SEQ ID NO: 1) or a portion thereof,FRH3 which comprises arginine at amino acid position 67 to arginine atamino acid position 98 (SEQ ID NO: 1) or a portion thereof, and FRH4which comprises tryptophan at amino acid position 110 to serine at aminoacid position 120 (SEQ ID NO: 1) or a portion thereof.

The invention also encompasses isolated anti-VEGF antibody andpolynucleotide embodiments. The invention also encompasses substantiallypure antibody and polynucleotide embodiments.

The anti-VEGF antibodies of the invention may be monoclonal (e.g., fulllength or intact monoclonal antibodies). In an embodiment of theinvention, the anti-VEGF antibody of the invention is a full lengthantibody. Further, in one example, the full length antibody comprises alight chain comprising the amino acid sequence shown in SEQ ID NO:3 anda heavy chain shown in SEQ ID NO:1. In another embodiment, the fulllength antibody comprises a light chain comprising the amino acidsequence shown in SEQ ID NO:3 and a heavy chain shown in SEQ ID NO:1, alight chain comprising the aspartic acid at amino acid position 24 tocysteine at amino acid position 237 (SEQ ID NO:17) and a heavy chaincomprising the glutamic acid at amino acid position 24 to threonine atamino acid position 251 (SEQ ID NO:18) (e.g. heavy chain Fab 216; FIG.16), or a light chain comprising the aspartic acid at amino acidposition 24 to cysteine at amino acid position 237 (SEQ ID NO:76) (e.g.,light chain Fab 216; FIG. 16) and a heavy chain comprising the glutamicacid at amino acid position 24 to threonine at amino acid position 251(SEQ ID NO:78) (e.g., heavy chain Fab 216; FIG. 16)

Also encompassed within the scope of the invention are Fab, Fab′,Fab′-SH and F(ab′)₂ fragments of the anti-VEGF antibodies providedherein. These antibody fragments can be created by traditional means,such as enzymatic digestion, or may be generated by recombinanttechniques, as well as through the use of chemical methods. For example,Fab′-SH, Fab′ with reduced —SH group such as at the cysteine that playsa role in interstrand cross link between two heavy chains, may beproduced by recombinant techniques or by chemical methods by reducingthe disulfide bonds of F(ab′)₂ antibody fragment. Such antibodyfragments may be chimeric or humanized. Fab and scFv fragments may beengineered to form dimers, trimers or tetramers by chemical or geneticcrosslinks to improve retention and internalization properties ascompared with the parent IgG. These fragments are useful for thediagnostic and therapeutic purposes set forth below.

A Fv fragment contains a complete antigen-recognition and -binding site.In a single-chain Fv species, a single heavy- and a single light-chainvariable domain may be covalently linked by a peptide linker such thatthe light and heavy chains may associate in a “dimeric” structure. It isin this configuration that the three CDRs of each variable domaininteract to define an antigen-binding site on the surface of the VH-VLdimer. Collectively, the six CDRs confer antigen-binding specificity tothe antibody. However, even a single variable domain (or half of an Fvcomprising only three CDRs specific for an antigen) has the ability torecognize and bind antigen, although at a lower affinity than the entirebinding site.

A Fab fragment contains a single antigen-binding site, and a residual“Fc” fragment. The Fab fragment also contains the constant domain of thelight chain and the first constant domain (CH1) of the heavy chain. Fab′fragments are encompassed herein and differ from Fab fragments by theaddition of a few residues at the carboxy terminus of the heavy chainCH1 domain including one or more cysteines from the antibody hingeregion. F(ab′)₂ antibody fragments are encompassed herein and are a pairof Fab′ fragments which have hinge cysteines between them. Otherchemical couplings of antibody fragments are known and encompassedherein.

Depending on the amino acid sequence of the constant domain of theirheavy chains, immunoglobulins can be assigned to different classes. Forexample, the antibodies of the invention may be any of immunoglobulinclass: IgA, IgD, IgE, IgG, and IgM. Moreover, within these classes, theycan be further divided into subclasses (isotypes) including any of,e.g., IgG₁, IgG₂, IgG₃, IgG₄, IgA₁, and IgA₂. The heavy-chain constantdomains that correspond to the different classes of immunoglobulins maybe any of α, δ, ε, γ, and μ, respectively.

Monoclonal antibodies are obtained from a population of substantiallyhomogeneous antibodies, i.e., the individual antibodies comprising thepopulation are identical except for possible naturally occurringmutations that may be present in minor amounts. Thus, the modifier“monoclonal” indicates the character of the antibody as not being amixture of discrete antibodies.

The anti-VEGF monoclonal antibodies of the invention can be made usingthe hybridoma method first described by Kohler et al., Nature, 256:495(1975), or may be made by recombinant DNA methods.

Additionally, the anti-VEGF antibodies of the invention can be made byusing combinatorial libraries to screen for synthetic antibody cloneswith the desired activity or activities. In principle, syntheticantibody clones are selected by screening phage libraries containingphage that display various fragments of antibody variable region (Fv)fused to phage coat protein. Such phage libraries are panned by affinitychromatography against the desired antigen. Clones expressing Fvfragments capable of binding to the desired antigen are adsorbed to theantigen and thus separated from the non-binding clones in the library.The binding clones are then eluted from the antigen, and can be furtherenriched by additional cycles of antigen adsorption/elution. Any of theanti-VEGF antibodies of the invention can be obtained by designing asuitable antigen screening procedure to select for the phage clone ofinterest followed by construction of a full length anti-VEGF antibodyclone using the Fv sequences from the phage clone of interest andsuitable constant region (Fec) sequences described in Kabat et al.,Sequences of Proteins of Immunological Interest, Fifth Edition, NIHPublication 91-3242, Bethesda Md. (1991), vols. 1-3.

Chimeric antibodies of the invention are immunoglobulin molecules thatcomprise a human and non-human portion. The antigen combining region(variable region) of a chimeric antibody can be derived from a non-humansource (e.g. murine) and the constant region of the chimeric antibodywhich confers biological effector function to the immunoglobulin can bederived from a human source. The chimeric antibody should have theantigen binding specificity of the non-human antibody molecule and theeffector function conferred by the human antibody molecule.

In general, the procedures used to produce chimeric antibodies caninvolve the following steps:

-   -   a) identifying and cloning the correct gene segment encoding the        antigen binding portion of the antibody molecule; this gene        segment (known as the VDJ, variable, diversity and joining        regions for heavy chains or VJ, variable, joining regions for        light chains or simply as the V or variable region) may be in        either the cDNA or genomic form;    -   b) cloning the gene segments encoding the constant region or        desired part thereof;    -   c) ligating the variable region with the constant region so that        the complete chimeric antibody is encoded in a form that can be        transcribed and translated;    -   d) ligating this construct into a vector containing a selectable        marker and gene control regions such as promoters, enhancers and        poly(A) addition signals;    -   e) amplifying this construct in bacteria;    -   t) introducing this DNA into eukaryotic cells (transfection)        most often mammalian lymphocytes;    -   g) selecting for cells expressing the selectable marker;    -   h) screening for cells expressing the desired chimeric antibody;        and    -   k) testing the antibody for appropriate binding specificity and        effector functions.

The invention encompasses multiple types of vectors. The term vector isany molecule or entity used to transfer protein coding information intoa host cell including, but not limited to, plasmids, bacteriophage,virus, cosmids, and phagemids. Moreover, certain vectors are capable ofdirecting the expression of genes to which they are operatively linked.Such vectors are referred to herein as recombinant expression vectors orexpression vectors. In general, expression vectors for use inrecombinant DNA techniques may be in the form of plasmids.

Antibodies of several distinct antigen binding specificities have beenmanipulated by these protocols to produce chimeric proteins [e.g.anti-TNP: Boulianne et al., Nature 312:643 (1984); and anti-tumorantigens: Sahagan et al., J. Immunol. 137:1066 (1986)]. Likewise,several different effector functions have been achieved by linking newsequences to those encoding the antigen binding region. Some of theseinclude enzymes [Neuberger et al., Nature 312:604 (1984)],immunoglobulin constant regions from another species and constantregions of another immunoglobulin chain [Sharon et al., Nature 309:364(1984); Tan et al., J. Immunol. 135:3565-3567 (1985)]. Additionally,procedures for modifying antibody molecules and for producing chimericantibody molecules using homologous recombination to target genemodification have been described (Fell et al., Proc. Natl. Acad. Sci.USA 86:8507-8511 (1989)).

The antigen-binding domain of an antibody is formed from two variable(V) regions of about 110 amino acids, one each from the light (VL) andheavy (VH) chains, that both present three hypervariable loops orcomplementarity-determining regions (CDRs). Variable domains can bedisplayed functionally on phage, either as single-chain Fv (scFv)fragments, in which VH and VL are covalently linked through a short,flexible peptide, or as Fab fragments, in which they are each fused to aconstant domain and interact non-covalently. “Single-chain Fv” or “scFv”antibody fragments comprise the VH and VL domains of antibody, whereinthese domains are present in a single polypeptide chain. Generally, thescFv polypeptide further comprises a polypeptide linker between the VHand VL domains which enables the scFv to form the desired structure forantigen binding. As used herein, scFv encoding phage clones and Fabencoding phage clones are collectively referred to as “Fv phage clones”or “Fv clones”.

“Hypervariable regions” are the regions of an antibody variable domainwhich are hypervariable in sequence and/or form structurally definedloops. In general, antibodies may comprise six hypervariable regions.These include three regions in the variable heavy chain (VH) which aredesignated H1, H2, H3. Additionally, there are three in the variablelight chain (VL) which are designated L1, L2, L3. A number ofhypervariable region delineations are in use and are encompassed herein.For example, the Kabat Complementarity Determining Regions (CDRs) arebased on sequence variability and may be used (Kabat et al., Sequencesof Proteins of Immunological Interest, 5th Ed. Public Health Service,National Institutes of Health, Bethesda, Md. (1991)).

Repertoires of VH and VL genes can be separately cloned by polymerasechain reaction (PCR). Then the clones may be recombined randomly inphage libraries and searched for antigen-binding clones. Libraries fromimmunized sources provide high-affinity antibodies to the immunogenwithout the requirement of constructing hybridomas. Alternatively, thenaive repertoire can be cloned to provide a single source of humanantibodies to a wide range of non-self and also self antigens withoutany immunization. Finally, naive libraries can also be madesynthetically by cloning the unrearranged V-gene segments from stemcells, and using PCR primers containing random sequence to encode thehighly variable CDR3 regions and to accomplish rearrangement in vitro.

Filamentous phage may be used to display antibody fragments. Theantibody fragments then can be displayed as single chain Fv fragments.The VH and VL domains may be connected on the same polypeptide chain bya flexible polypeptide spacer, or as Fab fragments, in which one chainis fused to pIII of the filamentous phage and the other is secreted intothe bacterial host cell periplasm where assembly of a Fab-coat proteinstructure which becomes displayed on the phage surface by displacingsome of the wild type coat proteins.

In general, nucleic acids encoding antibody gene fragments are obtainedfrom immune cells harvested from humans or animals. If a library biasedin favor of anti-VEGF clones is desired, the subject is immunized withVEGF to generate an antibody response, and spleen cells and/orcirculating B cells other peripheral blood lymphocytes (PBLs) arerecovered for library construction. In a preferred embodiment, a humanantibody gene fragment library biased in favor of anti-VEGF clones isobtained by generating an anti-VEGF antibody response in transgenic micecarrying a functional human immunoglobulin gene array (and lacking afunctional endogenous antibody production system) such that VEGFimmunization gives rise to B cells producing human antibodies againstVEGF. The generation of human antibody-producing transgenic mice isdescribed below.

Nucleic acids (also referred to herein as polynucleotides) refer topolymers of nucleotides of any length, and include DNA and RNA. Thenucleotides can be ribonucleotides, deoxyribonucleotides, modifiednucleotides or bases, and/or their analogs. A polynucleotide maycomprise modified nucleotides, such as methylated nucleotides and theiranalogs. The sequence of nucleotides may be interrupted bynon-nucleotide components. A polynucleotide may be further modifiedafter synthesis, including, for example, via conjugation with a label.

Percent amino acid sequence identity in connection with a peptide orpolypeptide sequence of the invention means the percentage of amino acidresidues in a candidate sequence that shares identity with the aminoacid residues in the specific peptide or polypeptide sequence of theinvention, after aligning the sequences and, if necessary, includinggaps to obtain the maximum percent sequence identity.

In another embodiment, the invention embodies an amino acid sequencewith a percent identity of at least 91%. In another embodiment, theinvention embodies an amino acid sequence with a percent identity of arange of about 92-98%. In another embodiment, the invention embodies anamino acid sequence with a percent identity of at least 99%. In oneembodiment, the amino acid sequence of the invention comprises only aportion of the entire sequence as provided in the invention, e.g., adeletion. Such a deletion may be internal or at an end. In oneembodiment, the amino acid sequence of the invention comprisesadditional amino acids wherein the additional amino acids are insertedwithin the amino acid sequence of the invention or are attached to theend. In one embodiment, the invention embodies an amino acidsubstitution wherein the substitution does not interfere with thebinding to VEGF or neutralizing VEGF function. Such substitutions areoften conservative amino acid substitution wherein the substitutingamino acid has functionally equivalent physiochemical properties, suchas aliphatic (glycine, alanine, valine, leucine, isoleucine), hydroxylor sulfur/selenium-containing (serine cysteine, selenocysteine,threonine, methionine), cyclic (proline), aromatic (phenylalanine,tyrosine, tryptophan), basic (histidine, lysine, arginine) and acidicand their amide (aspartate, glutamate, asparagine, and glutamine).

Nucleic acid encoding antibody variable gene segments (including VH andVL segments) may be recovered from the cells of interest and amplified.For example, the antibodies produced by naive libraries (either naturalor synthetic) can be of moderate affinity (K_(d) ⁻¹ of about 10⁶ to 10⁷M⁻¹), but affinity maturation can also be mimicked in vitro byconstructing and reselecting from secondary libraries. Additionally,affinity maturation can be performed by randomly mutating one or moreCDRs, e.g. using PCR with primers carrying random sequence spanning theCDR of interest, in selected individual Fv clones and screening forhigher affinity clones. Another effective approach is to recombine theVH or VL domains selected by phage display with repertoires of naturallyoccurring V domain variants obtained from unimmunized donors and screenfor higher affinity in several rounds of chain reshuffling. Thistechnique allows the production of antibodies and antibody fragmentswith higher affinities with Kd in the about 10⁻⁹ M range.

For example, an anti-VEGF antibody, portion or variant thereof of theinvention may bind human VEGF with a K_((d)) value of no more than about50 nM. In an another embodiment, the anti-VEGF antibody, portion orvariant thereof binds human VEGF with a K_((d)) value of no more thanabout 10 nM. In yet another embodiment, the anti-VEGF antibody, portionor variant thereof binds human VEGF with a K_((d)) value of no more thanabout 2.5 nM. In yet a further embodiment, the anti-VEGF antibody,portion or variant thereof binds human VEGF with a K_((d)) value of nomore than about 0.5 nM. In an additional embodiment, the anti-VEGFantibody, portion or variant thereof binds human VEGF with a K_((d))value of no more than about 0.15 nM. In yet additional embodiment, theanti-VEGF antibody, portion or variant thereof binds human VEGF with aK_((d)) value between 5 pM and 150 pM. In a further embodiment, theanti-VEGF antibody, portion or variant thereof binds human VEGF with aK_((d)) value of about 0.15 nM. In another further embodiment, theanti-VEGF antibody, portion or variant thereof of the invention bindshuman VEGF with a K_((d)) value of 90 pM±20 pM. In still a furtherembodiment, the anti-VEGF antibody, portion or variant thereof bindshuman VEGF with a K_((d)) value of about 25 pM. In an embodiment, theanti-VEGF antibody, portion or variant thereof binds human VEGF with aK_((d)) value of about pM. In yet another embodiment, the anti-VEGFantibody, portion or variant thereof of the invention has a higheraffinity for human VEGF than ranibizumab (Lucentis®; Novartis and Roche)or bevacizumab (Avastin®; Roche) with more than 3-fold lower K_((d))value than that for ranibizumab or bevacizumab. In yet a furtherembodiment, the antibody or portion or variant thereof has a relativeK_((d)) value for human VEGF that is more than 4-fold lower thanranibizumab (Lucentis®; Novartis and Roche). In another embodiment, theantibody or portion or variant thereof has a relative K_((d)) value forhuman VEGF that is more than 10-fold lower than ranibizumab (Lucentis®;Novartis and Roche). In another embodiment, the antibody or portion orvariant thereof has a relative K_((d)) value for human VEGF that is morethan 50-fold lower than ranibizumab (Lucentis®; Novartis and Roche). Inanother embodiment, the antibody or portion or variant thereof has arelative K_((d)) value for human VEGF that is about 55-fold lower thanranibizumab (Lucentis®; Novartis and Roche). In still anotherembodiment, the antibody or portion or variant thereof has a relativeK_((d)) value for human VEGF that is more than 10-fold lower thanbevacizumab (Avastin®; Roche). In another embodiment, the antibody orportion or variant thereof has a relative K_((d)) value for human VEGFthat is more than 50-fold lower than bevacizumab (Avastin®; Roche). Inanother embodiment, the antibody or portion or variant thereof has arelative K_((d)) value for human VEGF that is more than 100-fold lowerthan bevacizumab (Avastin®; Roche). In another embodiment, the antibodyor portion or variant thereof has a relative K_((d)) value for humanVEGF that is about 110-fold lower than bevacizumab (Avastin®; Roche).

In yet a further embodiment, the antibody or portion or variant thereofhas an IC50 value of no more than about 200 pM for inhibitingVEGF-induced proliferation of endothelial cells in vitro. Further, anadditional embodiment, the antibody or portion or variant thereof ismore effective at inhibiting VEGF-induced proliferation of endothelialcells in vitro than ranibizumab (Lucentis®; Novartis and Roche). In afurther embodiment the relative IC50 value for inhibiting VEGF-inducedproliferation of endothelial cells in vitro is about 1.5-fold lower thanranibizumab (Lucentis®; Novartis and Roche).

In an embodiment, the invention provides antibodies which have increasedstability. In one embodiment, the anti-VEGF antibody or portion ofvariant thereof, has greater stability than ranibizumab (Lucentis®;Novartis and Roche). In another embodiment, the anti-VEGF antibody orportion of variant thereof, has greater storage life than ranibizumab(Lucentis®; Novartis and Roche).

In an embodiment, the invention provides antibodies which have increasedthermal stability than ranibizumab (Lucentis®; Novartis and Roche). Forexample, the melting temperature of the humanized anti-VEGF antibody ofthe invention may be about 1.5° C. higher than that of ranibizumab(Lucentis®; Novartis and Roche).

In one embodiment, an anti-VEGF antibody of the invention, or portion orvariant thereof, does not bind BSA or Fc.

Following construction of the DNA molecule encoding the antibodiesagainst VEGF of the invention, the DNA molecule is operably linked to anexpression control sequence in an expression vector, such as a plasmid,wherein the control sequence is recognized by a host cell transformedwith the vector. In general, plasmid vectors contain replication andcontrol sequences which are derived from species compatible with thehost cell. The vector ordinarily carries a replication site, as well assequences which encode proteins that are capable of providing phenotypicselection in transformed cells. Suitable vectors for expression inprokaryotic and eukaryotic host cells are known in the art and some arefurther described herein. Eukaryotic organisms, such as yeasts, or cellsderived from multicellular organisms, such as mammals, may be used.

Host cells are transfected and preferably transformed with theabove-described expression or cloning vectors of this invention andcultured in conventional nutrient media modified as appropriate forinducing promoters, selecting transformants, or amplifying the genesencoding the desired sequences.

Transfection refers to the taking up of an expression vector by a hostcell whether or not any coding sequences are in fact expressed. Numerousmethods of transfection are known to the ordinarily skilled artisan, forexample, CaPO₄ precipitation and electroporation. Successfultransfection is generally recognized when any indication of theoperation of this vector occurs within the host cell. Methods fortransfection are well known in the art.

Transformation means introducing DNA into an organism so that the DNA isreplicable, either as an extrachromosomal element or by chromosomalintegrant. Depending on the host cell used, transformation is done usingstandard techniques appropriate to such cells. Methods fortransformation are well known in the art, and some are further describedherein.

Prokaryotic host cells used to produce the antibodies against VEGF ofthe invention can be cultured as described generally in Sambrook et al.,supra.

Mammalian host cells may be used to produce the antibodies against VEGFand may be cultured in a variety of media, which is well known in theart and some of which is described herein.

The host cells referred to in this disclosure encompass cells in invitro culture as well as cells that are within a host animal.Purification of antibodies against VEGF of the invention may beaccomplished using art-recognized methods, some of which are describedherein. The purified antibodies can be attached to a suitable matrixsuch as agarose beads, acrylamide beads, glass beads, cellulose, variousacrylic copolymers, hydroxyl methacrylate gels, polyacrylic andpolymethacrylic copolymers, nylon, neutral and ionic carriers, and thelike, for use in the affinity chromatographic separation of phagedisplay clones.

Phage library samples may be contacted with immobilized VEGF underconditions suitable for binding of at least a portion of the phageparticles with a solid phase. Normally, the conditions, including pH,ionic strength, temperature and the like are selected to mimicphysiological conditions. The phages bound to the solid phase may bewashed and then eluted. Phages can be enriched in a single round ofselection; and if enriched, can be grown in bacterial culture andsubjected to further rounds of selection. It is possible to selectbetween phage antibodies of different affinities, even with affinitiesthat differ slightly, for VEGF.

Reactivity of anti-VEGF mAbs against the target antigen may beestablished by a number of well known means, including Western blot,immunoprecipitation, ELISA, and FACS analyses using, as appropriate,VEGF proteins, peptides, VEGF-expressing cells or extracts thereof.Examples of such assays are presented in Example 1, infra.

The antibody or fragment thereof of the invention may be cytostatic tothe cell, to which it binds. As used herein, “cytostatic” means that theantibody can inhibit growth, but not necessarily kill, VEGF-positivecells.

DNA encoding the Fv clones of the invention can be combined with knownDNA sequences encoding heavy chain and/or light chain constant regionsto form clones encoding full or partial length heavy and/or lightchains. It will be appreciated that constant regions of any isotype canbe used for this purpose, including IgG, IgM, IgA, IgD, and IgE constantregions, and that such constant regions can be obtained from any humanor animal species. In a preferred embodiment, a Fv clone derived fromhuman variable DNA is fused to human constant region DNA to form codingsequence(s) for all human, full or partial length heavy and/or lightchains.

Antibody Fragments

The present invention encompasses antibody fragments. The smaller sizeof the antibody fragments compared to whole antibodies have certainadvantages. For example, fragments may allow for more rapid clearance,and may lead to improved access to sites of interest when compared withwhole antibodies.

For example, in one embodiment, the antibody fragment is a Fab whichcomprises a light chain variable domain comprising the amino acidsequence beginning at aspartic acid at position 1 and ending at lysineat position 107 of SEQ ID NO:3 and a heavy chain variable domaincomprising the amino acid sequence beginning at glutamic acid atposition 1 and ending at serine at position 120 of SEQ ID NO:1.

In another embodiment, the Fab fragment is joined to a Fc region whichcomprises the amino acid shown in SEQ ID NO:5. In yet anotherembodiment, the variant of the antibody is a recombinant proteincomprising the antigen-binding region of the antibody of the invention.For example, the variant may be a scFv which comprises the amino acidsequence beginning at aspartic acid at position 241 and ending at serineat position 483 of SEQ ID NO:9. In a further embodiment of theinvention, the scFv is joined to a Fc region. Merely by way of example,the scFv joined to a Fc region may comprise the amino acid shown in SEQID NO:9.

There are various techniques for the production of antibody fragments.The antibodies or fragments may be produced by recombinant means. Forexample, these fragments can be produced directly by recombinant hostcells. Fab, Fv and ScFv antibody fragments can all be expressed in andsecreted from, e.g., E. coli, thus allowing the relatively easyproduction of large amounts of these fragments. Antibody fragments canbe isolated from the antibody phage libraries discussed herein.Alternatively, Fab′-SH fragments can be directly recovered from E. coliand chemically coupled to form F(ab′)₂ fragments. According to anotherapproach, F(ab′)₂ fragments can be isolated directly from recombinanthost cell culture. Other techniques for the production of antibodyfragments will be apparent to the skilled practitioner. In otherembodiments, the antibody of choice is a single chain Fv fragment(scFv). Fv and sFv are the only species with intact combining sites thatare devoid of constant regions; thus, they are suitable for reducednonspecific binding during in vivo use, sFv fusion proteins may beconstructed to yield fusion of an effector protein at either the aminoor the carboxy terminus of an sFv.

Synthetic Human Anti-VEGF Antibodies

The invention further provides antibodies (e.g., polyclonal, monoclonal,chimeric, synthetic and humanized antibodies) that bind to VEGF. Themost preferred antibodies will selectively bind to VEGF and will notbind (or will bind weakly) to non-VEGF proteins. The most preferredantibodies will specifically bind to VEGF. It is intended that the term“specifically bind” means that the antibody predominantly binds to VEGF.Anti-VEGF antibodies that are particularly contemplated includemonoclonal and polyclonal antibodies as well as fragments thereof (e.g.,recombinant proteins) containing the antigen binding domain and/or oneor more complement determining regions of these antibodies. Theseantibodies can be from any source, e.g., rat, dog, cat, pig, horse,mouse or human.

In one embodiment, the anti-VEGF antibodies of the invention may beanti-VEGF neutralizing antibodies. In one embodiment, the anti-VEGFantibodies of the invention specifically bind to the VEGF protein and,e.g., inhibits VEGF-induced angiogenesis in vivo. As will be understoodby those skilled in the art, the regions or epitopes of a VEGF proteinto which an antibody of the invention is directed may vary with theintended application.

For example, antibodies intended for use in an immunoassay for thedetection of membrane-bound VEGF on viable cancer cells or ocular cellsshould be directed to an accessible epitope on membrane-bound VEGF.Different VEGF isoforms may have different potential for cell membranebinding. For example, the larger highly basic VEGF₁₈₉ and VEGF₂₀₆isoforms (isoforms of VEGF-A) bind tightly to cell-surfaceheparin-containing proteoglycans in the extracellular matrix (ECM) andhence is found tightly bound to cells; whereas, the acidic VEGF₁₂₁isoform (VEGF-A₁₂₁) lacks ability to bind heparin and is freelydiffusible. VEGF₁₆₅ isoform *VEGF-A₁₆₅) has intermediate properties witha significant fraction bound to heparin and ECM. Examples of suchantibodies are described in the Examples which follow. Antibodies thatrecognize other epitopes may be useful for the identification of VEGFwithin damaged or dying cells, for the detection of secreted VEGFproteins or fragments thereof.

Anti-VEGF antibodies of the invention may be particularly useful indiagnostic assays, imaging methodologies, treatment of eye disease,treatment of vision impairment, prevention of blindness and therapeuticmethods in the management of cancer. The invention provides variousimmunological assays useful for the detection of VEGF proteins and forthe diagnosis of cancer. Such assays generally comprise one or moreanti-VEGF antibodies capable of recognizing and binding a VEGF protein,and include various immunological assay formats well known in the art,including but not limited to various types of precipitation,agglutination, complement fixation, radioimmunoassays (RIA),enzyme-linked immunosorbent assays (ELISA), enzyme-linkedimmunofluorescent assays (ELIFA) (H. Liu et al. Cancer Research 58:4055-4060 (1998), immunohistochemical analysis and the like.

In one embodiment, anti-VEGF antibodies of the invention and fragmentsthereof (e.g., Fv, Fab′, F(ab′)₂) and variants thereof (e.g., scFv) areused therapeutically to treat a disease selected from retinal disorder,age-related macular degeneration (AMD), macular degeneration, wetage-related macular degeneration, diabetic retinopathy, diabeticmaculopathy, proliferative diabetic retinopathy, macular edema inretinal vein occlusion (RVO), macular edema secondary to Retinal veinOcclusion (RVO), iris neovascularization, retinal neovascularization,choroidal neovascularization caused by pathological myopia, macularedema, retinopathy of prematurity (ROP), retinopathy of maturity, parsplana vitrectomy (PPV), neovascular glaucoma, diabetic macular edema(DME) and eye disease associated with angiogenesis. The anti-VEGFantibodies of the invention and fragments thereof and variants thereofmay be used to prevent or stop progression of the aforementioneddiseases or conditions.

A therapeutically effective amount of a substance/molecule of theinvention, agonist or antagonist may vary according to factors such asthe disease state, age, sex, and weight of the individual, and theability of the substance/molecule, agonist or antagonist to elicit adesired response in the individual. A therapeutically effective amountis also one in which any toxic or detrimental effects of thesubstance/molecule, agonist or antagonist are outweighed by thetherapeutically beneficial effects. A prophylactically effective amountrefers to an amount effective, at dosages and for periods of timenecessary, to achieve the desired prophylactic result. Typically but notnecessarily, since a prophylactic dose is used in subjects prior to orat an earlier stage of disease, the prophylactically effective amountmay be less than the therapeutically effective amount.

In one embodiment, anti-VEGF antibodies of the invention and fragmentsthereof (e.g., Fv, Fab′, F(ab′)₂) are used for detecting the presence ofa cancer. The anti-VEGF antibodies of the invention and fragmentsthereof may be used to detect the presence of an ocular cell- orendothelial cell-expressing VEGF, -responding to VEGF, or -participatingin VEGF-dependent angiogenesis. The presence of such VEGF positive (+)cells within various biological samples, including serum, vitreoushumor, eye, prostate and other tissue biopsy specimens, other tissuessuch as bone, urine, etc., may be detected with VEGF antibodies. Inaddition, anti-VEGF antibodies may be used in various imagingmethodologies, such as immunoscintiography with Induim-111 (or otherisotope) conjugated antibody.

Anti-VEGF antibodies may also be used in methods for purifying VEGFproteins and peptides and for isolating VEGF homologues and relatedmolecules. For example, in one embodiment, the method of purifying aVEGF protein comprises incubating an anti-VEGF antibody, which has beencoupled to a solid matrix, with a lysate or other solution containingVEGF under conditions which permit the anti-VEGF antibody to bind toVEGF; washing the solid matrix to eliminate impurities; and eluting theVEGF from the coupled antibody. Additionally, anti-VEGF antibodies maybe used to isolate VEGF positive cells using cell sorting andpurification techniques.

In one embodiment, an isolated human anti-VEGF antibody or portion orvariant thereof that specifically recognizes and binds a VEGF comprisinga light chain variable domain comprising the following hypervariableregion or complementarity determining region (CDR) amino acid sequencesof variant 201, 202, 203, 204, 205, 206, 207, 208, 209, 212, 213, 214,215, 216, 217, 218, 219, or 220 as shown in Tables 5a and 5c. In anotherembodiment, an isolated human anti-VEGF antibody or portion or variantthereof that specifically recognizes and binds a VEGF comprising a heavychain variable domain comprising the following hypervariable region orcomplementarity determining region (CDR) amino acid sequences of variant201, 202, 203, 204, 205, 206, 207, 208, 209, 212, 213, 214, 215, 216,217, 218, 219, or 220 as shown in Tables 5b and 5d.

In one embodiment, an isolated human anti-VEGF antibody or portion orvariant thereof that specifically recognizes and binds a VEGF comprisingany of the light chain of variant 201, 202, 203, 204, 205, 206, 207,208, 209, 212, 213, 214, 215, 216, 217, 218, 219, or 220 comprisingamino acid sequence as provided in Table 5a or 5c. In anotherembodiment, an isolated human anti-VEGF antibody or portion or variantthereof that specifically recognizes and binds a VEGF comprising any ofthe heavy chain of variant 201, 202, 203, 204, 205, 206, 207, 208, 209,212, 213, 214, 215, 216, 217, 218, 219, or 220 comprising amino acidsequence as provided in Table 5b or 5d.

In one embodiment, an isolated human anti-VEGF antibody or portion orvariant thereof that specifically recognizes and binds a VEGFcomprising: a light chain variable domain comprising the followinghypervariable region or complementarity determining region (CDR) aminoacid sequences of variant 201, 202, 203, 204, 205, 206, 207, 208, 209,212, 213, 214, 215, 216, 217, 218, 219, or 220 as shown in Table 5a, anda corresponding heavy chain variable domain comprising the followinghypervariable region or complementarity determining region (CDR) aminoacid sequences of variant 201, 202, 203, 204, 205, 206, 207, 208, 209,212, 213, 214, 215, 216, 217, 218, 219, or 220 as shown in Table 5b.

In one embodiment, an isolated human anti-VEGF antibody or portion orvariant thereof that specifically recognizes and binds a VEGF comprisinga light chain variable domain comprising the following hypervariableregion or complementarity determining region (CDR) amino acid sequencesof variant 201, 202, 203, 204, 205, 206, 207, 208, 209, 212, 213, 214,215, 216, 217, 218, 219, or 220 as shown in Table 5c, and acorresponding heavy chain variable domain comprising the followinghypervariable region or complementarity determining region (CDR) aminoacid sequences of variant 201, 202, 203, 204, 205, 206, 207, 208, 209,212, 213, 214, 215, 216, 217, 218, 219, or 220 as shown in Table 5d.

Humanized and Human Antibodies

The present invention encompasses novel humanized anti-VEGF antibodies.Humanized antibodies are chimeric antibodies that contain sequencederived from non-human immunoglobulin. For example, humanized antibodiesare human immunoglobulins (recipient antibody) wherein residues from ahypervariable region of a recipient are replaced by residues from ahypervariable region of a non-human species (donor antibody) such as anonhuman primate, mouse, rat or rabbit having the desired specificity,affinity, and capacity. In some cases, framework region (FR) residues ofthe human immunoglobulin may be replaced by corresponding non-humanresidues. Further, humanized antibodies may comprise residues that arenot found in the recipient antibody or in the donor antibody in order tofurther refine antibody performance. The humanized antibody may alsocomprise at least a portion of an immunoglobulin constant region (Fe),typically that of a human immunoglobulin. Chimeric antibodies may have aportion of the heavy and/or light chain identical with or homologous tocorresponding sequences in antibodies derived from a particular speciesor belonging to a particular antibody class or subclass, while theremainder of the chain(s) is identical with or homologous tocorresponding sequences in antibodies derived from another species orbelonging to another antibody class or subclass, as well as fragments ofsuch antibodies, so long as they exhibit the desired biologicalactivity.

Methods for producing fully human anti-VEGF monoclonal antibodies of theinvention, include phage display and transgenic methods. For example,fully human anti-VEGF monoclonal antibodies of the invention may begenerated using cloning technologies employing large human Ig genecombinatorial libraries (i.e., phage display). Fully human anti-VEGFmonoclonal antibodies of the invention may also be produced usingtransgenic mice engineered to contain a human immunoglobulin gene.

Bispecific Antibodies

Bispecific antibodies are anti-VEGF monoclonal, preferably human orhumanized, antibodies of the invention that have binding specificitiesfor at least two different antigens. In the present case, one of thebinding specificities is for VEGF and the other is for any otherantigen. Exemplary bispecific antibodies may bind to two differentepitopes of the VEGF protein.

In one embodiment of the invention, the bispecific antibody has abinding specificity for two different antigens, one of the antigensbeing that with which the antibody of invention binds. For example, thebispecific antibody may comprises an amino acid sequence comprising theamino acid sequence for CDRH1 (e.g., amino acid position 31 to histidineat amino acid position 35 (SEQ ID NO: 1)) or a portion thereof, CDRH2(e.g., tyrosine at amino acid position 50 to glycine at amino acidposition 66 (SEQ ID NO: 1)) or a portion thereof, CDRH3 (e.g., histidineat amino acid position 99 to tyrosine at amino acid position 109 (SEQ IDNO: 1)) or a portion thereof, CDRL1 (e.g., arginine at amino acidposition 24 to alanine at amino acid position 34 (SEQ ID NO: 3)) or aportion thereof, CDRL2 (e.g., lysine at amino acid position 50 toalanine at amino acid position 56 (SEQ ID NO: 3)) or a portion thereof,or CDRL3 (e.g., glutamine at amino acid position 89 to threonine atamino acid position 97 (SEQ ID NO: 3)) or a portion thereof, or acombination thereof.

Bispecific antibodies may also be used to localize cytotoxic agents tocells which express VEGF. These antibodies possess an VEGF-binding armand an arm which binds the cytotoxic agent (e.g. saporin,anti-interferon-.alpha., vinca alkaloid, ricin A chain, methotrexate orradioactive isotope hapten). Bispecific antibodies can be prepared asfull length antibodies or antibody fragments (e.g. F(ab′)₂ bispecificantibodies). Methods for making bispecific antibodies are known in theart. Antibodies with more than two valencies are contemplated. Forexample, trispecific antibodies can be prepared.

Antibody Variants

In some embodiments, amino acid sequence modification(s) of theanti-VEGF antibodies described herein are contemplated. Amino acidsequence variants of the antibody may be prepared by, e.g., introducingappropriate nucleotide changes into the antibody nucleic acid, or bypeptide synthesis. Such modifications include, for example, deletionsfrom, and/or insertions into and/or substitutions of, residues withinthe amino acid sequences of the antibody. Any combination of deletion,insertion, and substitution is made to arrive at the final construct,provided that the final construct possesses the desired characteristics.

Further, the contemplates Fc region variants that may be obtained byintroducing one or more amino acid modifications in an Fc region of theimmunoglobulin polypeptides of the invention. The Fc region variant maycomprise a human Fc region sequence (e.g., a human IgG1, IgG2, IgG3 orIgG4 Fc region) comprising an amino acid modification (e.g. asubstitution) at one or more amino acid positions including that of ahinge cysteine. In accordance with this description and the teachings ofthe art, it is contemplated that in some embodiments, an antibody usedin methods of the invention may comprise one or more alterations ascompared to the wild type counterpart antibody, e.g. in the Fc region.

Nucleic Acids, Vectors, Host Cells and Recombinant Methods

Another aspect of the invention provides various nucleic acid moleculesencoding anti-VEGF antibody and fragments thereof, preferably inisolated form, including DNA, RNA, DNA/RNA hybrid, and relatedmolecules, nucleic acid molecules complementary to the anti-VEGFantibody-coding sequence or a part thereof, and those which hybridize tothe anti-VEGF antibody-encoding nucleic acids. Particularly preferrednucleic acid molecules will have a nucleotide sequence substantiallyidentical to or complementary to the human or murine DNA sequencesherein disclosed. Specifically contemplated are genomic DNA, cDNAs,ribozymes, and antisense molecules, as well as nucleic acids based on analternative backbone or including alternative bases, whether derivedfrom natural sources or synthesized.

The invention further provides fragments of the anti-VEGFantibody-encoding nucleic acid molecules of the present invention. Asused herein, a fragment of an anti-VEGF antibody-encoding nucleic acidmolecule refers to a small portion of the entire anti-VEGFantibody-encoding sequence. The size of the fragment will be determinedby its intended use.

In one embodiment, the invention provides an isolated nucleic acidencoding an immunoglobulin heavy chain or a portion thereof, animmunoglobulin light chain or a portion thereof, or both, of a specificbinding member that binds to human VEGF. In an embodiment of theinvention, said specific binding member comprises an antigen-bindingportion of an antibody, wherein the immunoglobulin heavy chain or aportion thereof, of the antigen-binding portion of the antibodycomprises an immunoglobulin heavy chain CDRH1 comprising the nucleicacid sequence beginning at cytosine at position 91 and ending atcytosine at position 105 (SEQ ID NO: 1) or a portion thereof, an heavychain CDRH2 comprising the nucleic acid sequence beginning at thymine atposition 148 and ending at cytosine at position 198 (SEQ ID NO: 1) or aportion thereof, and an heavy chain CDRH3 comprising the nucleic acidsequence beginning at cytosine at position 295 and ending at cytosine atposition 327 (SEQ ID NO: 1) or a portion thereof; and/or wherein theimmunoglobulin light chain or portion thereof, of the antigen-bindingportion of the antibody comprises a light chain CDRL1 comprising thenucleic acid sequence beginning at cytosine at position 70 and ending atcytosine at position 102 (SEQ ID NO: 3) or a portion thereof, a lightchain CDRL2 comprising the nucleic acid sequence beginning at adenine atposition 148 to cytosine at position 168 (SEQ ID NO: 3) or a portionthereof, and a light chain CDRL3 comprising the nucleic acid sequencebeginning at cytosine at position 265 and ending at guanine at position291 (SEQ ID NO: 3) or a portion thereof.

For example, a nucleic acid molecule encoding an anti-VEGF antibody ofthe invention may be considered isolated when the nucleic acid moleculeis substantially separated from contaminant nucleic acid molecules thatencode polypeptides other than a VEGF antibody. A skilled artisan canreadily employ nucleic acid isolation procedures to obtain an isolatedVEGF antibody-encoding nucleic acid molecule. While achieving a highdegree of purity is desirable, isolated nucleic acid need not be pure orachieve absolute purity in order to be an isolated nucleic acid.

In another embodiment, any of the nucleic acid sequence as provided in(a) or (b) above may be replaced with an equivalent nucleic acidsequence encoding for same amino acid sequence. In yet an additionalembodiment, the antibody further comprises a human or humanized constantregion. For example, the human or humanized constant region may be anIgG1 constant region. In another example, the human or humanizedconstant region is an IgG4 constant region.

In one embodiment of the invention, the isolated nucleic acid comprisesthe sequence shown in SEQ ID NO: 16.

In still another embodiment, the isolated nucleic acid sequence encodesa specific binding member which is a single chain Fv molecule comprisingthe nucleic acid sequence beginning at guanine at position 721 tothymine at position 1449 as shown in SEQ ID NO: 9 or a portion thereof.In still another additional embodiment, the specific binding member is aFab comprising the nucleic acid sequences shown in SEQ ID NOS: 1 and 3or a portion(s) thereof. In a further embodiment, the heavy chain of theantibody comprises a FR amino acid sequence comprising the amino acidsequence beginning at guanine at position 70 to thymine at position 711as shown in SEQ ID NO: 16 and the nucleic acid sequence beginning atguanine at position 897 to adenine at position 1580 in SEQ ID NO: 16 ora portion(s) thereof. In another embodiment, the specific binding memberis a Fab comprising the nucleic acid sequence beginning at adenine atposition 1 to thymine at position 711 as shown in SEQ ID NO: 16 and thenucleic acid sequence beginning at adenine at position 828 to adenine atposition 1580 in SEQ ID NO: 16 or a portion(s) thereof.

In still another embodiment, the specific binding member is a Fabcomprising the nucleic acid sequences shown in SEQ ID NO: 16 or aportion thereof.

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin heavychain framework region (FR) 1. FRH1, comprising the nucleic acidsequence beginning at guanine at position 1 and ending at thymine atposition 90 (SEQ ID NO: 1) encoding an amino acid sequence glutamic acidat amino acid position 1 to phenylalanine at amino acid position 30 (SEQID NO: 1).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin heavychain framework region (FR) 2, FRH2, comprising the nucleic acidsequence beginning at thymine at position 106 and ending at adenine atposition 147 (SEQ ID NO: 1) encoding an amino acid sequence tryptophanat amino acid position 36 to alanine at amino acid position 49 (SEQ IDNO: 1).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin heavychain framework region 3, FRH3, comprising the nucleic acid sequencebeginning at cytosine at position 199 and ending at cytosine at position294 (SEQ ID NO: 1) encoding an amino acid sequence arginine at aminoacid position 67 to arginine at amino acid position 98 (SEQ ID NO: 1).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin heavychain framework region 4, FRH4, comprising the nucleic acid sequencebeginning at thymine at position 328 and ending at guanine at position360 (SEQ ID NO: 1) encoding an amino acid sequence tryptophan at aminoacid position 110 to serine at amino acid position 120 (SEQ ID NO: 1).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises a heavy chain frameworkregion FRH1 comprising the nucleic acid sequence beginning at guanine atposition 1 and ending at thymine at position 90 (SEQ ID NO: 1) encodingan amino acid sequence glutamic acid at amino acid position 1 tophenylalanine at amino acid position 30 (SEQ ID NO: 1), a heavy chainframework region FRH2 comprising the nucleic acid sequence beginning atthymine at position 106 and ending at adenine at position 147 (SEQ IDNO: 1) encoding an amino acid sequence tryptophan at amino acid position36 to alanine at amino acid position 49 (SEQ ID NO: 1), a heavy chainframework region FRH3 comprising the nucleic acid sequence beginning atcytosine at position 199 and ending at cytosine at position 294 (SEQ IDNO: 1) encoding an amino acid sequence arginine at amino acid position67 to arginine at amino acid position 98 (SEQ ID NO: 1), and a heavychain framework region FRH4 comprising the nucleic acid sequencebeginning at thymine at position 328 and ending at guanine at position360 (SEQ ID NO: 1) encoding an amino acid sequence tryptophan at aminoacid position 110 to serine at amino acid position 120 (SEQ ID NO: 1),wherein the nucleic acid sequences encoding the heavy chain frameworkregions, FR-11 to FRH4, and the heavy chain complementarity determiningregions, CDRH1 to CDRH3, are joined in the orderFRH1-CDRH1-FRH2-CDRH2-FRH3-CDRH3-FRH4.

In one embodiment, the isolated nucleic acid comprises the nucleic acidsequence for a heavy chain variable region beginning at guanine atposition 1 and ending at guanine at position 360 (SEQ ID NO: 1) encodingan amino acid sequence glutamic acid at amino acid position 1 to serineat amino acid position 120 (SEQ ID NO: 1).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin lightchain framework region 1, FRL1, comprising the nucleic acid sequencebeginning at guanine at position 1 and ending at cytosine at position 69(SEQ ID NO: 3) encoding an amino acid sequence aspartic acid at aminoacid position 1 to cysteine at amino acid position 23 (SEQ ID NO: 3).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin lightchain framework region 2, FRL2, comprising the nucleic acid sequencebeginning at thymine at position 103 and ending at cytosine at position147 (SEQ ID NO: 3) encoding an amino acid sequence tryptophan at aminoacid position 35 to tyrosine at amino acid position 49 (SEQ ID NO: 3).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin lightchain framework region 3, FRL3, comprising the nucleic acid sequencebeginning at guanine at position 169 and ending at thymine at position264 (SEQ ID NO: 3) encoding an amino acid sequence glycine at amino acidposition 57 to cysteine at amino acid position 88 (SEQ ID NO: 3).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises an immunoglobulin lightchain framework region 4, FRL4, comprising the nucleic acid sequencebeginning at thymine at position 292 and ending at adenine at position321 (SEQ ID NO: 3) encoding an amino acid sequence phenylalanine atamino acid position 98 to lysine at amino acid position 107 (SEQ ID NO:3).

In an embodiment, the isolated nucleic acid encoding an immunoglobulinheavy chain or a portion thereof, an immunoglobulin light chain or aportion thereof, or both, of a specific binding member that binds tohuman VEGF, said specific binding member comprising an antigen-bindingportion of an antibody additionally comprises a light chain frameworkregion FRL1 comprising the nucleic acid sequence beginning at guanine atposition 1 and ending at cytosine at position 69 (SEQ ID NO: 3) encodingan amino acid sequence aspartic acid at amino acid position 1 tocysteine at amino acid position 23 (SEQ ID NO: 3), a light chainframework FRL2 comprising the nucleic acid sequence beginning at thymineat position 103 and ending at cytosine at position 147 (SEQ ID NO: 3)encoding an amino acid sequence tryptophan at amino acid position 35 totyrosine at amino acid position 49 (SEQ ID NO: 3), a light chainframework FRL3 comprising the nucleic acid sequence beginning at guanineat position 169 and ending at thymine at position 264 (SEQ ID NO: 3)encoding an amino acid sequence glycine at amino acid position 57 tocysteine at amino acid position 88 (SEQ ID NO: 3), a light chainframework FRL4 comprising the nucleic acid sequence beginning at thymineat position 292 and ending at adenine at position 321 (SEQ ID NO: 3)encoding an amino acid sequence phenylalanine at amino acid position 98to lysine at amino acid position 107 (SEQ ID NO: 3), wherein the nucleicacid sequences encoding the light chain framework regions FRL1 to FRL4and the light chain complementarity determining regions CDRL1 to CDRL3are joined in the order FRL1-CDRL1-FRL2-CDRL2-FRL3-CDRL3-FRL4.

In one embodiment, the isolated nucleic acid of claim 4 or 68, whereinthe nucleic acid encoding for each CDR and each FR amino acid sequenceis defined by IMGT method are the following: IMGT-defined CDRH1comprising the nucleic acid sequence beginning at guanine at position 76and ending at thymine at position 99 (SEQ ID NO: 79); IMGT-defined CDR12comprising the nucleic acid sequence beginning at adenine at position151 and ending at thymine at position 174 (SEQ ID NO: 79); IMGT-definedCDRH3 comprising the nucleic acid sequence beginning at guanine atposition 289 and ending at cytosine at position 327 (SEQ ID NO: 79);IMGT-defined CDRL1 comprising the nucleic acid sequence beginning atcytosine at position 79 and ending at cytosine at position 96 (SEQ IDIMGT-defined CDRL2 comprising the nucleic acid sequence beginning atadenine at position 148 and ending at cytosine at position 156 (SEQ IDNO: 77); IMGT-defined CDRL3 comprising the nucleic acid sequencebeginning at cytosine at position 265 and ending at guanine at position291 (SEQ ID NO: 77); IMGT-defined FRH1 comprising the nucleic acidsequence beginning at guanine at position 1 and ending at thymine atposition 75 (SEQ ID NO: 79) encoding an amino acid sequence glutamicacid at amino acid position 1 to serine at amino acid position 25 (SEQID NO: 79); IMGT-defined FRH2 comprising the nucleic acid sequencebeginning at adenine at position 100 and ending at cytosine at position150 (SEQ ID NO: 79) encoding an amino acid sequence isoleucine at aminoacid position 34 to tyrosine at amino acid position 50 (SEQ ID NO: 79);IMGT-defined FRH3 comprising the nucleic acid sequence beginning atthymine at position 175 and ending at thymine at position 288 (SEQ 11)NO: 79) encoding an amino acid sequence tyrosine at amino acid position59 to cysteine at amino acid position 96 (SEQ ID NO: 79); IMGT-definedFRH4 comprising the nucleic acid sequence beginning at thymine atposition 328 and ending at guanine at position 360 (SEQ ID NO: 79)encoding an amino acid sequence tryptophan at amino acid position 110 toserine at amino acid position 120 (SEQ ID NO: 79); IMGT-defined FRL1comprising the nucleic acid sequence beginning at guanine at position 1and ending at thymine at position 78 (SEQ ID NO: 77) encoding an aminoacid sequence aspartic acid at amino acid position 1 to serine at aminoacid position 26 (SEQ ID NO: 77); IMGT-defined FRL2 comprising thenucleic acid sequence beginning at guanine at position 97 and ending atcytosine at position 147 (SEQ ID NO: 77) encoding an amino acid sequencevaline at amino acid position 33 to tyrosine at amino acid position 49(SEQ ID NO: 77); IMGT-defined FRL3 comprising the nucleic acid sequencebeginning at guanine at position 157 and ending at thymine at position264 (SEQ ID NO:77) encoding an amino acid sequence glutamic acid atamino acid position 53 to cysteine at amino acid position 88 (SEQ ID NO:77); and/or IMGT-defined FRL4 comprising the nucleic acid sequencebeginning at thymine at position 292 and ending at adenine at position321 (SEQ ID NO: 77) encoding an amino acid sequence phenylalanine atamino acid position 98 to lysine at amino acid position 107 (SEQ ID NO:77).

In one embodiment, the isolated nucleic acid comprises the nucleic acidsequence for a light chain variable region beginning at guanine atposition 1 and ending at adenine at position 321 (SEQ ID NO: 3) encodingan amino acid sequence aspartic acid at amino acid position 1 to lysineat amino acid position 107 (SEQ ID NO: 3).

In an additional embodiment of the invention, the nucleic acid encodes aspecific binding member which is an antibody.

In yet another embodiment, the heavy chain of the antibody comprises theFF03046-2 V_(H) domain from glutamic acid at amino acid position 1 toserine at amino acid position 120 (SEQ ID NO: 1) and a CH1 domain of ahuman IgG1 constant region from alanine at amino acid position 121 tovaline at amino acid position 218 (SEQ ID NO: 1), and wherein the lightchain of the antibody comprises the FF03046-2 V_(L) domain from asparticacid at amino acid position 1 to lysine at amino acid position 107 (SEQID NO: 3) and a human kappa light chain constant region from arginine atamino acid position 108 to cysteine at amino acid position 214 (SEQ IDNO: 3).

In yet another embodiment, the heavy chain of the antibody comprises theFF03046-2 V_(W) domain from glutamic acid at amino acid position 1 toserine at amino acid position 120 (SEQ ID NO: 1), a CH1 domain of ahuman IgG1 constant region from alanine at amino acid position 121 tovaline at amino acid position 218 (SEQ ID NO: 1), and a portion of ahinge region of a human IgG1 constant region from glutamic acid at aminoacid position 219 to threonine at amino acid position 228 (SEQ ID NO:1), and wherein the light chain of the antibody comprises the FF03046-2V_(L) domain from aspartic acid at amino acid position 1 to lysine atamino acid position 107 (SEQ ID NO: 3) and a human kappa light chainconstant region from arginine at amino acid position 108 to cysteine atamino acid position 214 (SEQ ID NO: 3).

Also, the invention provides an embodiment wherein the heavy chain ofthe antibody comprises the FF03046-2 VH; domain from glutamic acid atamino acid position 261 to serine at amino acid position 380 (SEQ ID NO:16) and a CH1 domain of a human IgG1 constant region from alanine atamino acid position 381 to valine at amino acid position 478 (SEQ ID NO:16), and wherein the light chain of the antibody comprises the FF03046-2VL domain from aspartic acid at amino acid position 24 to lysine atamino acid position 130 (SEQ ID NO: 16) and a human kappa light chainconstant region from arginine at amino acid position 131 to cysteine atamino acid position 237 (SEQ ID NO: 16).

The invention provides an embodiment wherein the heavy chain of theantibody comprises the FF03046-2 V_(H) domain from glutamic acid atamino acid position 261 to serine at amino acid position 380 (SEQ ID NO:16), a CH1 domain of a human IgG1 constant region from alanine at aminoacid position 381 to valine at amino acid position 478 (SEQ ID NO: 16),and a portion of a hinge region of a human IgG1 constant region fromglutamic acid at amino acid position 479 threonine at amino acidposition 488 (SEQ ID NO: 16), and wherein the light chain of theantibody comprises the FF03046-2 V_(L) domain from aspartic acid atamino acid position 24 to lysine at amino acid position 130 (SEQ ID NO:16) and a human kappa light chain constant region from arginine at aminoacid position 131 to cysteine at amino acid position 237 (SEQ ID NO:16). The invention provides an isolated nucleic acid having a sequenceas provided in SEQ ID NO: 16.

In one embodiment, a constitutive promoter is used to the control theexpression of the antibody, portion or variant thereof of the invention.In a separate embodiment, a regulatable or an inducible promoter is useto express the antibody, portion or variant thereof of the invention. Inone embodiment, the regulatable or an inducible promoter is a pho Apromoter. The invention provide an isolated nucleic acid, wherein thepho A promoter comprises a nucleic acid sequence as provided in SEQ IDNO: 15 or a portion thereof.

The invention provides an isolated nucleic acid sequence, whereintermination of transcription of the nucleic acid is under the control ofa transcriptional terminator. In one embodiment, the transcriptionalterminator is a ribosomal RNA gene terminator. In one embodiment, theribosomal RNA gene terminator comprises a nucleic acid sequence asprovided in SEQ ID NO: 19 or a portion thereof.

The invention provides an isolated nucleic acid sequence wherein theisolated nucleic acid sequence is in a vector. In one embodiment, thevector comprises an origin of replication. In another embodiment, thevector comprises a colE1 origin of replication.

In one embodiment, the vector comprises a selectable marker or ascreening marker. In one embodiment, the selectable marker or screeningmarker is selected from the group consisting of a drug selectablemarker, a fluorescent protein, a cell surface marker, an enzyme, aluminescent protein, a metabolic marker, a growth factor and aresistance factor. In one embodiment, the vector is pBR322 deleted oftetracycline resistance gene as provided in SEQ ID NO: 20.

The invention provides an isolated nucleic acid, wherein the nucleicacid encoding the antibody of the invention does not bind BSA or Fc.

For recombinant production of an antibody of the invention, the nucleicacid encoding it may be isolated and inserted into a replicable vectorfor further cloning (amplification of the DNA) or for expression. DNAencoding the antibody is readily isolated and sequenced usingconventional procedures (e.g., by using oligonucleotide probes that arecapable of binding specifically to genes encoding the heavy and lightchains of the antibody). Many vectors are available. The choice ofvector depends in part on the host cell to be used. Generally, preferredhost cells are of either prokaryotic or eukaryotic (generally mammalian)origin. It will be appreciated that constant regions of any isotype canbe used for this purpose, including IgG, IgM, IgA, IgD, and IgE constantregions, and that such constant regions can be obtained from any humanor animal species.

The isolated nucleic acid encoding an anti-VEGF antibody of theinvention may have a silent mutation or mutations. Additionally, theisolated nucleic acid of the invention may have a missense mutation ormutations, wherein the nucleotide substitution results in a change inthe identity of the amino acid but not in a prematurely truncatedpolypeptide due to the substitution leading to specification of atranslation termination codon. The isolated nucleic acid of theinvention may have an inframe deletion or insertion, wherein thedeletion or insertion occurs as a multiple of 3 bases or basepairs.

Also provided are recombinant DNA molecules (rDNAs) that contain ananti-VEGF antibody-encoding sequences as herein described, or a fragmentthereof. As used herein, a rDNA molecule is a DNA molecule that has beensubjected to molecular manipulation in vitro. Methods for generatingrDNA molecules are well known in the art, for example, see Sambrook elal., Molecular Cloning (1989). In the preferred rDNA molecules of thepresent invention, an anti-VEGF-antibody encoding DNA sequence thatencodes an anti-VEGF antibody or a fragment thereof, is operably linkedto one or more expression control sequences and/or vector sequences. TherDNA molecule can encode either the entire VEGF antibody, or can encodea fragment of the VEGF antibody.

The choice of vector and/or expression control sequences to which theVEGF antibody-encoding sequence is operably linked depends directly, asis well known in the art, on the functional properties desired, e.g.,protein expression, and the host cell to be transformed. A vectorcontemplated by the present invention is at least capable of directingthe replication or insertion into the host chromosome, and preferablyalso expression, of the VEGF antibody-encoding sequence included in therDNA molecule.

Expression control elements that are used for regulating the expressionof an operably linked protein encoding sequence are known in the art andinclude, but are not limited to, inducible promoters, constitutivepromoters, secretion signals, enhancers, transcription terminators andother regulatory elements. For example, the transcription of the nucleicacid of the invention may be under the control of a ribosomal RNAterminator. In one embodiment, the ribosomal RNA terminator comprises anucleic acid sequence as provided in SEQ ID NO: 19 or a portion thereof.

In one embodiment, the vector containing an anti-VEGF antibody-encodingnucleic acid molecule will include a prokaryotic replicon, i.e., a DNAsequence having the ability to direct autonomous replication andmaintenance of the recombinant DNA molecule intrachromosomally in aprokaryotic host cell, such as a bacterial host cell, transformedtherewith. Such replicons are well known in the art. In addition,vectors that include a prokaryotic replicon may also include a genewhose expression confers a detectable or selectable marker such as adrug resistance. Typical bacterial drug resistance genes are those thatconfer resistance to ampicillin or tetracycline.

Expression vectors compatible with eukaryotic cells, preferably thosecompatible with vertebrate cells, can also be used to insert ananti-VEGF antibody-encoding sequence and express anti-VEGF antibody ofthe invention. Eukaryotic cell expression vectors are well known in theart and are available from several commercial sources. Typically, suchvectors are provided containing convenient restriction sites forinsertion of the desired DNA segment. Such vectors may supply apromoter/enhancer combination for either constitutive or regulatableexpression of the anti-VEGF antibody. In addition, such vectors mayinclude a transcription terminator effective in a eukaryotic cell.

Eukaryotic cell expression vectors used to construct the rDNA moleculesof the present invention may further include a selectable marker that iseffective in an eukaryotic cell, preferably a drug resistance selectionmarker.

In accordance with the practice of the invention, the vector can be aplasmid, a cosmid, a viral vector or phage vector containing theanti-VEGF antibody-encoding sequences of the invention or a portionthereof. Additionally, the invention anticipates a host-vector systemcomprising the plasmid, cosmid, viral vector or phage vector transfectedinto a suitable eukaryotic host cell. Examples of suitable eukaryotichost cells include a yeast cell, a plant coil, or an animal cell, suchas a mammalian cell. The host-vector system is useful for the productionof an anti-VEGF antibody or portion or variant thereof. Alternatively,the host cell can be prokaryotic, such as a bacterial cell, as providedin the invention.

Many vectors that are available and known in the art can be used for thepurpose of the present invention. The vector components generallyinclude, but are not limited to: an origin of replication, a selectionmarker gene, a promoter, a ribosome binding site (RBS), a signalsequence, the heterologous nucleic acid insert and a transcriptiontermination sequence. For example, the nucleic acid may be expressedunder the control of a pho A promoter. In one embodiment, the pho Apromoter comprises a nucleic acid sequence as provided in SEQ ID NO: 15or a portion thereof. Pho A promoter may be induced to transcribedownstream nucleic acid sequences (such as a nucleic acid sequence ofthe invention) under low phosphate condition (such as a phosphateconcentration of below 0.05 mM).

The expression vector of the invention may comprise two or morepromoter-cistron pairs, encoding each of the polypeptide components.Alternatively, the expression vector may comprise one promoter with morethan one cistron to encode more than one polypeptide component. Apromoter is an untranslated regulatory sequence located upstream (5′) toa cistron that modulates its expression. Prokaryotic promoters typicallyfall into two classes, inducible and constitutive. Inducible promoter isa promoter that initiates increased levels of transcription of thecistron under its control in response to changes in the culturecondition, e.g. the presence or absence of a nutrient or a change intemperature.

In one embodiment of the invention, an inducible promoter, such as a phoA promoter, is placed upstream and operationally linked to a nucleicacid encoding both immunoglobulin light chain and immunoglobulin heavychain or portion or variant thereof. Induction of the pho A promoter bylow phosphate condition results in transcription of downstream nucleicsequences and production of a RNA transcript, which in the case of a phoA promoter placed upstream and operationally linked to a nucleic acidencoding both immunoglobulin light chain and immunoglobulin heavy chainresults in the production of a bicistronic mRNA. In one embodiment,translation of the bicistronic mRNA results in the production of both animmunoglobulin heavy chain and an immunoglobulin light chain, as in thecase of Clone #201.

Variant clone #201, comprising Fab 201 coding sequences (SEQ ID NO: 16)and can be used for bacterial expression of Fab 201 (FIG. 17), wasdeposited on Sep. 5, 2017, with the American Type Culture Collection(ATCC), 10801 University Blvd., Manassas, Va. 20110-2209, under theprovisions of the Budapest Treaty, and have been accorded ATCC depositnumbers Not Yet Known.

A large number of promoters recognized by a variety of potential hostcells are well known. In some embodiments, heterologous promoters areutilized, as they generally permit greater transcription and higheryields of expressed target gene as compared to the native targetpolypeptide promoter. In addition to naturally occurring promoters froma host cell or non-host cell, viral promoters and artificial promoterare known in the art. In eukaryotic cells (such as yeast, insect ormammalian cells), promoters are used in combination with transcriptionenhancers.

Transformed Host Cells

The invention further provides host cells transformed with a nucleicacid molecule that encodes an anti-VEGF antibody or a fragment thereof.The host cell can be either prokaryotic or eukaryotic. Eukaryotic cellsuseful for expression of an anti-VEGF antibody are not limited, so longas the cell line is compatible with cell culture methods and compatiblewith the propagation of the expression vector and expression of ananti-VEGF antibody gene. Preferred eukaryotic host cells include, butare not limited to, yeast, insect and mammalian cells, preferablyvertebrate cells such as those from a mouse, rat, monkey or human cellline. Preferred vertebrate cell lines include, but are not limited to,CHO and HEK293. Most preferred vertebrate cell lines are those approvedfor the manufacture or production of biologics. The preferredprokaryotic host is either E. coli, or B. subtili.

Transformation, transfection or transduction of appropriate cell hostswith an rDNA molecule of the present invention is accomplished by wellknown methods that typically depend on the type of vector used and hostsystem employed. With regard to transformation of prokaryotic hostcells, electroporation and salt-heat shock treatment methods aretypically employed, see, for example, Cohen et al., Proc Acad Sci USA(1972) 69:2110; and Maniatis et al., Molecular Cloning, A LaboratoryManual, Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. (1982).In addition, prokaryotic host cells may be infected or transduced with aphage comprising a nucleic acid encoding an anti-VEGF antibody of theinvention. With regard to transfection of vertebrate cells with vectorscontaining rDNAs, electroporation, cationic lipid or salt treatmentmethods are typically employed, see, for example, Graham et al., Virol(1973) 52:456; Wigler et al., Proc Natl Acad Sci USA (1979) 76:1373-76.In addition, vertebrate cells may be infected or transduced with aneukaryotic viral particle comprising a nucleic acid encoding ananti-VEGF antibody. Such a viral particles may be DNA or RNA viralparticles, and may include, but are not limited to, adenoviral,adenovirus-associated viral, retroviral and lentiviral particles.

Successfully transformed, transfected or transduced cells, i.e., cellsthat contain an rDNA molecule of the present invention, can beidentified by well known techniques. For example, cells resulting fromthe introduction of an rDNA of the present invention can be cloned toproduce single colonies. Cells from those colonies can be harvested,lysed and their DNA content examined for the presence of the rDNA usinga method such as that described by Southern, J Mol Biol (1975) 98:503,or Berent et al., Biotech (1985) 3:208 or the proteins produced from thecell assayed via an immunological method. Alternatively, sister cellsmay be analyzed may be analyzed by highly sensitive methods known in theart for the presence of foreign nucleic acid. The transformed,transfected or transduced cells may also be isolated or identified onthe basis of markers (either drug selectable markers, imaging markers ordetectable markers) present on the same nucleic acid introduced into thecell or on separate nucleic acid co-introduced into the cell.

Prokaryotic host cells suitable for expressing antibodies of theinvention include Archaebacteria and Eubacteria, such as Gram-negativeor Gram-positive organisms. Examples of useful bacteria includeEscherichia (e.g., E. coli), Bacilli (e.g., B. subtilis),Enterobacteria, Pseudomonas species (e.g., P. aeruginosa), Salmonellatyphimurium, Serratia marcescans, Klebsiella, Proteus, Shigella,Rhizobia, Vitreoscilla, or Paracoccus.

Antibody Production

Various methods for the preparation of antibodies are well known in theart. For example, host cells may be transformed with the above-describedexpression vectors and cultured in conventional nutrient media modifiedas appropriate for inducing promoters, selecting transformants, oramplifying the genes encoding the desired sequences.

Transformation means introducing DNA into the prokaryotic host so thatthe DNA is replicable, either as an extrachromosomal element or bychromosomal integrant. Depending on the host cell used, transformationis done using standard techniques appropriate to such cells.

Prokaryotic cells used to produce the polypeptides of the invention aregrown in media known in the art and suitable for culture of the selectedhost cells. Examples of suitable media include Luria broth (LB) plusnecessary nutrient supplements.

Antibody Purification

Standard protein purification methods known in the art can be employed.The following procedures are exemplary of suitable purificationprocedures: fractionation on immunoaffinity or ion-exchange columns,SDS-PAGE, ammonium sulfate precipitation, reverse phase HPLC,chromatography on silica or on a cation-exchange resin such as DEAE, andgel filtration using, for example, Sephadex G-75.

Immunoconjugates

The invention also provides immunoconjugates (interchangeably termed“antibody-drug conjugates” or “ADC”), comprising any of the anti-VEGF ofthe invention (including e.g., a portion or variant thereof describedherein) conjugated to a cytotoxic or therapeutic agent such as achemotherapeutic agent, a drug, a growth inhibitory agent, a toxin(e.g., an enzymatically active toxin of bacterial, fungal, plant, oranimal origin, or fragments thereof), or a radioactive agent (i.e., aradioconjugate). For example, the therapeutic agent includes, but is notlimited to, an anti-tumor drug, a cytokine, a second antibody, orportion of an antibody (e.g., Fc). Further, the invention provides anembodiment wherein the antibody of the invention is linked to an enzymethat converts a prodrug into a cytotoxic drug. In accordance with thepractice of the invention, the portion of the antibody may be selectedfrom the group consisting of scFv, Fv, Fab, Fab′, and F(ab′)₂ fragments.

A growth inhibitory agent refers to a compound or composition whichinhibits growth of a cell either in vitro or in vivo. Examples of growthinhibitory agents include agents that block cell cycle progression, suchas classical M-phase blockers which include the vincas (vincristine andvinblastine), taxanes, and topoisomerase II inhibitors such asdoxorubicin, epirubicin, daunorubicin, etoposide, and bleomycin.Additional suitable agents include, for example, DNA alkylating agentssuch as tamoxifen, prednisone, dacarbazine, mechlorethamine, cisplatin,methotrexate, 5-fluorouracil, and ara-C.

The antibody or fragment thereof of the invention may be labeled with adetectable marker thereby resulting in an immunoconjugate, e.g., adiagnostic immunoconjugate.

The immunoconjugate can be used for targeting the second molecule to aVEGF positive cell (Vitetta, E. S. et al., 1993, Immunotoxin therapy, inDeVita, Jr., V. T. et al., eds, Cancer: Principles and Practice ofOncology, 4th ed., J.B. Lippincott Co., Philadelphia, 2624-2636).

Examples of cytotoxic agents include, but are not limited to ricin,ricin A-chain, doxorubicin, daunorubicin, taxol, ethidium bromide,mitomycin, etoposide, tenoposide, vincristine, vinblastine, colchicine,dihydroxy anthracin dione, actinomycin D, diphteria toxin, Pseudomonasexotoxin (PE) A, PE40, abrin, abrin A chain, modeccin A chain,alpha-sarcin, gelonin, mitogellin, restrictocin, phenomycin, enomycin,curicin, crotin, calicheamicin, Saponaria officinalis inhibitor,maytansinoids, and glucocorticoid and other chemotherapeutic agents, aswell as radioisotopes such as ²¹²Bi, ¹³¹I, ¹³¹In, ⁹⁰Y, and ¹⁸⁶Re.Suitable detectable markers include, but are not limited to, aradioisotope, a fluorescent compound, a bioluminescent compound,chemiluminescent compound, a metal chelator or an enzyme. Antibodies mayalso be conjugated to an anti-cancer pro-drug activating enzyme capableof converting the pro-drug to its active form.

Additionally, the recombinant protein of the invention comprising theantigen-binding region of any of the monoclonal antibodies orrecombinant antibodies of the invention can be used to treat cancer. Insuch a situation, the antigen-binding region of the recombinant proteinis joined to at least a functionally active portion of a second proteinhaving therapeutic activity. The second protein can include, but is notlimited to, an enzyme, lymphokine, oncostatin or toxin. Suitable toxinsinclude those described above.

Techniques for conjugating or joining therapeutic agents to antibodiesare well known (see, e.g., Amon et al., “Monoclonal Antibodies ForImmunotargeting Of Drugs In Cancer Therapy”, in Monoclonal AntibodiesAnd Cancer Therapy, Reisfeld et al. (eds.), pp. 243-56 (Alan R. Liss,Inc. 1985); Hellstrom et al., “Antibodies For Drug Delivery”, inControlled Drug Delivery (2nd Ed.), Robinson et al. (eds.), pp. 623-53(Marcel Dekker, Inc. 1987); Thorpe, “Antibody Carriers Of CytotoxicAgents In Cancer Therapy: A Review”, in Monoclonal Antibodies '84:Biological And Clinical Applications, Pinchera et al. (eds.), pp.475-506 (1985); and Thorpe et al., “The Preparation And CytotoxicProperties Of Antibody-Toxin Conjugates”, Immunol. Rev., 62:119-58(1982)). The use of VEGF antibodies as therapeutic agents is furtherdescribed herein.

Methods for Isolating Other Anti-VEGF Antibody-Encoding Nucleic AcidMolecules

The anti-VEGF antibody-encoding nucleic acid molecules described hereinenable the isolation of anti-VEGF antibody homologues, alternativelysliced isoforms, allelic variants, and mutant forms of the anti-VEGFantibody of the invention as well as their coding and gene sequences.

For example, a portion of the anti-VEGF antibody-encoding sequenceherein described can be synthesized and used as a probe to retrieve DNAencoding a member of the anti-VEGF antibody family of proteins fromorganisms other than human, allelic variants of the human VEGF proteinherein described, and genomic sequence containing the anti-VEGF antibodygene. Oligomers (or oligonucleotides) containing approximately 16-21nucleotides (encoding about a 5-7 amino acid stretch) may be preparedand used to screen genomic DNA or cDNA libraries to obtain hybridizationunder stringent conditions or conditions of sufficient stringency toeliminate an undue level of false positives. Oligomers of particularinterest are those that encode for the amino acid sequence of thehypervariable region or complementarity determining region (CDR) of theanti-VEGF antibodies of the invention. The oligomers may be preparedfrom a CDR sequence described herein or a portion of such a CDRsequence. The oligomers may be prepared from recoding an amino acidsequence of a CDR described herein or a portion thereof, such thattranslation of the oligomer or its complement encodes for a CDRdescribed herein or a portion thereof.

Additionally, pairs of oligonucleotide primers may be prepared for usein a polymerase chain reaction (PCR) to selectively amplify/clone ananti-VEGF antibody-encoding nucleic acid molecule, or fragment thereof.A PCR denature/anneal/extend cycle for using such PCR primers is wellknown in the art and can readily be adapted for use in isolating otheranti-VEGF antibody-encoding nucleic acid molecules.

Non-human homologues of anti-VEGF antibody-encoding sequences, naturallyoccurring allelic variants of anti-VEGF antibody-encoding sequences andgenomic anti-VEGF antibody-encoding sequences will share a high degreeof homology to the human anti-VEGF-antibody sequences in CDR portions ofthe antibody herein described. In general, such nucleic acid moleculeswill hybridize to the human VEGF sequence under stringent conditions.Such sequences will typically contain at least 70% homology, preferablyat least 80%, most preferably at least 90% homology to the humananti-VEGF antibody-encoding sequence.

Stringent conditions are those that (1) employ low ionic strength andhigh temperature for washing, for example, 0.015M NaCl/0.0015M sodiumnitrate/0.1% SDS at 50° C., or (2) employ during hybridization adenaturing agent such as formamide, for example, 50% (vol/vol) formamidewith 0.1% bovine serum albumin/0.1% Ficoll/0.1% polyvinylpyrrolidone/50mM sodium phosphate buffer at pH 6.5 with 750 mM NaCl. 75 mM sodiumcitrate at 42° C.

Another example is use of 50% formamide, 5×SSC (0.75M NaCl, 0.075 Msodium citrate), 50 mM sodium phosphate (pH 6.8), 0.1% sodiumpyrophosphate, 5×Denhardt's solution, sonicated salmon sperm DNA (50μg/ml), 0.1% SDS, and 10% dextran sulfate at 42° C., with washes at 42°C. in 0.2×SSC and 0.1% SDS. A skilled artisan can readily determine andvary the stringency conditions appropriately to obtain a clear anddetectable hybridization signal.

Other anti-VEGF-antibody-encoding nucleic acid molecules may be obtainedthrough mutagenesis of the CDR-coding region or FR-coding region andcharacterizing the resulting antibodies for ability to bind VEGF. Forthe FR-coding region, nucleotides adjacent to the CDR-coding region maybe preferred sites of mutagenesis except for those encoding cysteinesthat participate in intrastrand disulfide bond formation and a conservedtryptophan at the amino terminal end of FRH4, immediately followingCDRH3.

Assays for Identifying Competitive Inhibition Antibodies

Another aspect of the invention relates to assays and methods that canbe used to detect and identify additional anti-VEGF antibodies that bindto the same or overlapping epitopes to VEGF as recognized and bound bythe antibodies of the invention. Specifically, anti-VEGF antibodies andother agents and cellular constituents that bind to VEGF can beidentified by the ability of the anti-VEGF antibodies to bind to VEGFand/or the ability to inhibit/stimulate VEGF activity. Assays forVEGF-binding activity may require VEGF protein or its fragment or itspeptide are suitable for use in high through-put screening methods.

Alternatively, antibodies immunoreactive with critical position of theVEGF protein (recognized by any of the antibodies of the invention) maybe selected from an antibody library, such as a naïve synthetic Fabphage display library. Following initial screening, focused mutagenesisof the CDR sequences may be performed and additional rounds of screeningdone with limited VEGF protein or portion of VEGF protein to select outimproved anti-VEGF antibodies with desirable activity (e.g., highaffinity antibodies for VEGF). Additional rounds of mutagenesis andscreenings may be performed with the selected Fab sequences present inthe selected phages until the desired outcome is reached.

Diagnostic Uses of the Invention

There are multiple diagnostic uses of the invention. For example, theinvention provides methods for diagnosing in a subject, e.g., an animalor human subject, macular degeneration or vision impairment or loss(actual or potential) associated with excess production of VEGF in aneye, or cancer associated with the presence of the VEGF protein. In oneembodiment, the method comprises quantitatively determining the numberof VEGF protein in the sample (e.g., cell or biological fluid sample)using any one or combination of the antibodies of the invention. Thenthe number so determined can be compared with the amount in a samplefrom a normal subject. The presence of a measurably different amount(i.e., the number of VEGF in the test sample exceeds the number from anormal sample) in the samples indicating the presence or increased riskof macular degeneration or vision impairment or loss or the presence ofthe cancer. VEGF is overexpressed by a cell when the number of VEGF inthe test sample exceeds the number from a normal sample.

In another embodiment, diagnosis involves quantitatively determining ina sample from the subject the amount of RNA encoding the VEGF proteinusing the nucleic acid of the invention. The amount so determined can becompared with the amount of RNA in a sample from a normal subject. Onceagain, the presence of a measurable different amount indicating thepresence or increased risk of macular degeneration or vision impairmentor loss or the presence of the cancer.

Further, the invention provides a method for diagnosing a neoplastic orpreneoplastic condition in a subject. This method comprises obtainingfrom the subject a sample of a tissue, detecting a difference in theamount and/or distribution of VEGF in the using the method above, adistinct measurable difference being indicative of such neoplastic orpre-neoplastic condition.

In accordance with the practice of the invention, the antibody of theinvention can be directed to the epitope to which any of the monoclonalantibodies of the invention is directed. Further, the tissue section canbe from the bladder, prostate, bone, lymphatic tissues, pancreas, otherorgans, or muscle.

Further, the invention provides a method for diagnosing maculardegeneration or vision impairment or loss associated with the presenceof excess VEGF in an eye of a subject. This method comprises obtainingfrom the subject a sample of an eye tissue or cell, detecting adifference in the amount of VEGF in the tissue or cell using the methodabove, a distinct measurable difference being indicative of maculardegeneration or vision impairment or loss associated with the presenceof excess VEGF in an eye of a subject.

The invention also provides methods of detecting and quantitativelydetermining the concentration of VEGF in a biological fluid sample. Inone embodiment the method comprises contacting a solid support with anexcess of one or more monoclonal antibodies of the invention which forms(preferably specifically forms) a complex with VEGF under conditionspermitting the monoclonal antibody to attach to the surface of the solidsupport. The resulting solid support to which the monoclonal antibody isattached is then contacted with a biological fluid sample so that theVEGF in the biological fluid binds to the antibody and forms aVEGF-antibody complex. The complex can be labeled directly or indirectlywith a detectable marker. Alternatively, either the VEGF or the antibodycan be labeled before formation of the complex. The complex can then bedetected and quantitatively determined thereby detecting andquantitatively determining the concentration of VEGF in the biologicalfluid sample. A high concentration of VEGF in the sample relative to abiological fluid of a normal control being indicative of a neoplastic orpreneoplastic condition. Alternatively, a high concentration of VEGF inthe sample relative to a biological fluid of a normal control beingindicative of presence or increased risk of macular degeneration orvisual impairment or loss. In the latter case, the biological fluid isobtained from an eye.

In accordance with the practice of the invention, the biological fluidincludes but is not limited to vitreous humor, tissue extract, urine,blood, serum, and phlegm. Further, the detectable marker includes but isnot limited to an enzyme, biotin, a fluorophore, a chromophore, a heavymetal, a paramagnetic isotope, or a radioisotope.

Further, the invention provides a diagnostic kit comprising an antibodyof the invention that recognizes and binds VEGF (an anti-VEGF antibody);and a conjugate of a detectable label and a specific binding partner ofthe anti-VEGF antibody. In accordance with the practice of the inventionthe label includes, but is not limited to, enzymes, radiolabels,chromophores and fluorescers.

Methods for Monitoring the Course of a Disease Associated with VEGF

Additionally, the invention provides methods for monitoring the courseof macular degeneration or vision impairment, or cancer (e.g., prostate,bone metastases of prostate cancer, bladder, pancreatic cancer) ordisorders associated with VEGF in a subject by measuring the amount ofVEGF in a sample from the subject at various points in time. This isdone for purposes of determining a change in the amount of VEGF in thesample e.g., to determine whether the change is a small change in theamount or a large change, i.e., overexpression of VEGF. In oneembodiment, the method comprises quantitatively determining in a firstsample from the subject the presence of a VEGF protein and comparing theamount so determined with the amount present in a second sample from thesubject, such samples being taken at different points in time, adifference in the amounts determined being indicative of the course ofthe macular degeneration or vision impairment or the cancer.

In another embodiment, monitoring is effected by quantitativelydetermining in a first sample from the subject the presence of a VEGFRNA and comparing the amount so determined with the amount present in asecond sample from the subject, such samples being taken at differentpoints in time, a difference in the amounts determined being indicativeof the course of the macular degeneration or vision impairment or thecancer (e.g., prostate, bone metastases of prostate cancer, bladder andpancreatic cancer).

The sample can be from an animal or a human. Further, the sample can bea cell sample. For example, using the methods of the invention, organtissues such as eye tissue or cell, prostate tissue, bladder tissue,pancreatic tissue, neuroendocrine tissue, and bone (any tissue wherecarcinomas can metastasize, e.g., node, lung, liver, pancreas) can beevaluated for the presence or increased risk of macular degeneration orvision impairment or loss, or the presence of cancer or metastaticlesion. Alternatively, the sample can be a biological fluid, e.g.,extracellular fluid of the eye, vitreous humor, urine, blood sera orplasma.

In accordance with the practice of the invention, detection can beeffected by immunologic detection means involving histology, blotting,ELISA, and ELIFA. When the sample is a tissue or cell sample it can beformalin-fixed, paraffin-embedded or frozen.

The invention additionally provides methods of determining a differencein the amount and distribution of VEGF in tissue sections from an eye ora neoplastic tissue to be tested relative to the amount and distributionof VEGF in tissue sections from a normal tissue. In one embodiment, themethod comprises contacting both the tissue to be tested and the normaltissue with a monoclonal antibody of the invention that specificallyforms a complex with VEGF and thereby detecting the difference in theamount and distribution of VEGF.

Cancer Therapy and Therapy of Disorders Associated with VEGF Such asMacular Degeneration or Eye Disease/Disorder Associated with VEGF

The invention provides anti-VEGF antibodies of the invention that may beused, e.g., systemically, to treat diseases associated with VEGF such asWet Age Related Macular Degeneration, Diabetic Maculopathy,Proliferative Diabetic Retinopathy, Macular edema in Retinal VeinOcclusion (RVO), Iris neovascularization, Choroidal neovascularisationcaused by pathological myopia, Retinopathy of Maturity, Neovascularglaucoma and/or cancer.

Antibodies which target the disease cells but not the surroundingnon-diseased cells and tissue are preferred. Thus, the inventionprovides a method of treating a patient susceptible to or having adisease which expresses VEGF antigen, comprising administering to saidpatient an effective amount of an antibody of the invention which bindsspecifically to the VEGF protein. In another approach, the inventionprovides a method of inhibiting the growth of tumor cells expressingVEGF, comprising administering to a patient an antibody which bindsspecifically to the VEGF in an amount effective to inhibit growth of thetumor cells. VEGF mAbs of the invention may also be used in a method forselectively inhibiting the growth of or killing a cell expressing VEGFantigen comprising reacting a VEGF antibody immunoconjugate orimmunotoxin of the invention with the cell in an amount sufficient toinhibit the growth of or kill the cell.

For example, unconjugated anti-VEGF antibody of the invention (includingmonoclonal, polyclonal, chimeric, humanized, fully human and fragmentsthereof (e.g., recombinant proteins)) may be introduced into a patientsuch that the antibody binds to VEGF on disease cells and mediatesgrowth inhibition of such cells (including the destruction thereof), andthe tumor, by mechanisms which may include complement-mediatedcytolysis, antibody-dependent cellular cytotoxicity, altering thephysiologic function of VEGF, and/or the inhibition of ligand binding orsignal transduction pathways. In addition to unconjugated anti-VEGFantibodies, fragments thereof, and recombinant proteins of theinvention, anti-VEGF antibodies conjugated to toxic agents such as ricinmay also be used therapeutically to deliver the toxic agent directly toVEGF-bearing tumor cells and thereby destroy the tumor.

For example, one way to apply monoclonal antibodies of the inventionclinically is to administer them in unmodified form, using monoclonalantibodies of the invention which display cell inhibition/killingactivity (e.g., ADCC and CDC activity). In one embodiment, to detectADCC and CDC activity, anti-VEGF antibodies of the invention can betested for lysing cultured ⁵¹Cr-labeled tumor target cells over a 4-hourincubation period. Target cells may be labeled with ⁵¹Cr and then can beexposed for a few hours (e.g., four hours) to a combination of effectorcells (in the form of human lymphocytes purified by the use of alymphocyte-separation medium) and antibody, which is added inconcentrations, e.g., varying between 0.1 μg/ml and 10 μg/ml. Therelease of ⁵¹Cr from the target cells may be measured as evidence oftumor-cell lysis (cytotoxicity). The total amount of ⁵¹Cr that can bereleased may be measured and ADCC may be calculated as the percentkilling of target cells observed with monoclonal antibody plus effectorcells as compared to target cells being incubated alone.

In the practice of the method of the invention, anti-VEGF antibodiescapable of inhibiting the growth of diseased cells expressing VEGF onthe cell surface are administered in a therapeutically effective amountto patients having a disease as described herein whose diseased cellsexpress or overexpress VEGF. The anti-VEGF mAb therapy method of theinvention may provide remarkable growth inhibition of diseased cells invivo. The antibody therapy methods of the invention may be combined witha chemotherapeutic, radiation, and/or other therapeutic regimen.

Patients may be evaluated for the presence and level of VEGFoverexpression in diseased cells, preferably using immunohistochemicalassessments of diseased tissue, quantitative VEGF imaging, or othertechniques capable of reliably indicating the presence and degree ofVEGF expression. Immunohistochemical analysis of cell biopsies orsurgical specimens may be preferred for this purpose. Methods forimmunohistochemical analysis of diseased tissues are well known in theart.

The methods of the invention contemplate the administration of singleanti-VEGF antibody of the invention as well as combinations, or“cocktails, of different individual anti-VEGF antibodies such as thoserecognizing different epitopes. Such mAbs in combination may exhibitsynergistic therapeutic effects. In addition, the administration ofanti-VEGF mAbs may be combined with other therapeutic agents, includingbut not limited to various cytotoxic agents. The anti-VEGF mAbs may beadministered in their unconjugated form, or may have therapeutic agentsconjugated to them.

The anti-VEGF monoclonal antibodies used in the practice of the methodof the invention may be formulated into pharmaceutical compositionscomprising a carrier suitable for the desired delivery method. Suitablecarriers include any material which when combined with the anti-VEGFmAbs retains the anti-disease function of the antibody and isnon-reactive with the subject's immune systems. Examples include, butare not limited to, any of a number of standard pharmaceutical carrierssuch as sterile phosphate buffered saline solutions, and the like.

The present invention provides various methods, local or systemic, foradministering the anti-VEGF antibody formulations of the invention tothe disease site. As is standard practice in the art, the compositionsof the invention may be administered to the subject in anypharmaceutically acceptable form.

Potentially effective routes of administration include, but are notlimited to, injections, such as intraocular injections, intravenous,intramuscular, intraperitoneal, oral, inhalation and subcutaneousmethods, as well as by implantable pump, continuous infusion, genetherapy, liposomes, suppositories, topical contact, vesicles, capsules,biodegradable polymers, hydrogels, and controlled release patch. Thecomposition of the invention, compounded with a carrier, may be packagedas a sterile solution to be administered directly to a disease site,e.g., an eye.

In accordance with the invention, administering of the compositions ofthe invention can comprise co-administration, e.g. concomitantly or insequence, of a therapeutically effective amount of a composition of theinvention, with one or more additional compositions of the invention.Administration can also comprise a continuous release (time-release) ofthe agent(s), for example, the agent(s) can be embedded in atime-release capsule or other continuous release material.

Generally, treatment may involve the administration of the anti-VEGFantibody of the invention by means of an acceptable route ofadministration at an effective dose. Dosages will depend upon variousfactors generally appreciated by those of skill in the art, includingwithout limitation the type of disease and the severity, grade, or stageof the disease, the binding affinity and half life of the anti-VEGFantibody of the invention used, the degree of VEGF expression in thepatient, the desired steady-state antibody concentration level,frequency of treatment, and, when used, the influence ofchemotherapeutic agents used in combination with the treatment method ofthe invention. Typical daily doses may range from about 0.1 to 100mg/kg. The primary determining factor in defining the appropriate doseis the amount of a particular antibody necessary to be therapeuticallyeffective in a particular context. Repeated administrations may berequired in order to achieve disease inhibition or regression.

Binding affinity generally refers to the strength of the sum total ofnoncovalent interactions between a single binding site of a molecule(e.g., an antibody) and its binding partner (e.g., an antigen). Affinitycan be measured by common methods known in the art, including thosedescribed herein. A variety of methods of measuring binding affinity areknown in the art, any of which can be used for purposes of the presentinvention.

Direct administration of VEGF mAbs is also possible and may haveadvantages in certain contexts. For example, for the treatment ofmacular degeneration, VEGF antibodies of the invention may be injecteddirectly into the macula area of the eye.

The invention further provides methods for inhibiting cellular activity(e.g., cell proliferation, activation, or propagation) of a cellexpressing multiple VEGF antigens on its cell surface. This methodcomprises reacting the immunoconjugates of the invention (e.g., aheterogeneous or homogenous mixture) with the cell so that the VEGFantigen on the cell surface forms a complex with the immunoconjugate.The greater the number of VEGF antigens on the cell surface, the greaterthe number of VEGF-antibody complexes form. The greater the number ofVEGF-antibody complexes the greater the cellular activity that isinhibited. A subject with a disease, such as a neoplastic orpreneoplastic condition, can be treated in accordance with this methodwhen the inhibition of cellular activity results in cell inhibition ordeath.

The invention further provides methods for inhibiting the biologicalactivity of VEGF by blocking VEGF from binding its receptor or a VEGFpartner. The methods comprises contacting an amount of VEGF with anantibody or immunoconjugate of the invention under conditions thatpermit a VEGF-immunoconjugate or VEGF-antibody complex thereby blockingVEGF from binding its receptor or a VEGF-partner and inhibiting theactivity of VEGF.

In another embodiment, the invention provides methods for selectivelyinhibiting a cell expressing VEGF antigen by reacting any one or acombination of the immunoconjugates of the invention with the cell in anamount sufficient to inhibit the cell. Such amounts include an amount tokill the cell or an amount sufficient to inhibit cell growth orproliferation. As discussed supra the dose and dosage regimen willdepend on the nature of the disease or disorder to be treated associatedwith VEGF, its population, the site to which the antibodies are to bedirected, and the patient.

Pharmaceutical Compositions

The present invention provides compositions comprising any of the novelanti-VEGF antibodies of the invention. The phrase “pharmaceuticallyacceptable carrier” refers to any carrier known to those skilled in theart to be suitable for the particular mode of administration. Inaddition, the novel anti-VEGF antibodies of the invention may beformulated as the sole pharmaceutically active ingredient in thecomposition or may be combined with other active ingredients.

The compositions herein may comprise one or more novel anti-VEGFantibodies of the invention.

The novel anti-VEGF antibodies of the invention are, in one embodiment,formulated into suitable pharmaceutical preparations such as in sterilesolutions or suspensions for parenteral administration.

In the compositions, effective concentrations of one or more novelanti-VEGF antibodies of the invention may be mixed with a suitablepharmaceutical carrier. The amount or concentration of the anti-VEGFantibodies of the invention in the compositions are effective fordelivery of an amount, upon administration, that treats, prevents, orameliorates one or more of the symptoms of diseases or disorders to betreated.

In one embodiment, a therapeutically effective dosage may produce aserum concentration of active ingredient of from about 0.1 ng/ml toabout 50-100 μg/ml. The pharmaceutical compositions, in anotherembodiment, may provide a dosage of from about 0.001 mg to about 2000 mgof compound per kilogram of body weight per day. Pharmaceutical dosageunit forms are prepared and may provide from about 0.01 mg, 0.1 mg or 1mg to about 500 mg, 1000 mg or 2000 mg, and in one embodiment from about0.5 mg to about 500 mg of the active ingredient or a combination ofessential ingredients per dosage unit form.

In one embodiment, the composition comprises an anti-VEGF antibody orportion or variant thereof, polysorbate 20, sucrose, sodium chloride,and a buffer. In one embodiment, the composition comprises a phosphatebuffer. In one embodiment, the phosphate buffer has a pH between 5.0 and6.0. In another embodiment, the composition comprises a buffer (e.g., ahistidine buffer). In one embodiment, the histidine buffer has a pHbetween about 5.0 and 6.5 (preferably at about pH 6.0). In anotherembodiment, the composition comprises a citrate buffer. In anotherembodiment, the composition comprises a sodium citrate buffer. In oneembodiment, the sodium citrate buffer has a pH between about 5.0 and 6.5(preferably at about pH 6.0).

In one embodiment, the composition comprises an anti-VEGF antibody orportion or variant thereof at a concentration of about 2 mg/ml to about100 mg/ml). In one embodiment, the composition comprises polysorbate 20at a concentration of 0.1% to 0.04%. In one embodiment, the compositioncomprises sucrose at a concentration of 1% to 20%. In one embodiment,the composition comprises sodium chloride at a concentration of 10 mM to80 mM. In one embodiment, the composition comprises a phosphate bufferat a concentration of 10 mM to 100 mM. In one embodiment, thecomposition comprises a histidine buffer at a concentration of 5 mM to50 mM. In one embodiment, the composition comprises a sodium citratebuffer at a concentration of 5 mM to 20 mM.

In one embodiment, the composition comprises an anti-VEGF antibody orportion or variant thereof at a concentration of about 5 mg/ml, 0.03%polysorbate 20, 5% sucrose, 40 mM sodium chloride, and 10 mM phosphatebuffer (pH 5.8). In another embodiment, the composition comprises ananti-VEGF antibody or portion or variant thereof at a concentration ofabout 5 mg/ml, 0.03% polysorbate 20, 5% sucrose, 40 mM sodium chloride,and 10 mM histidine buffer (pH 5.8). In one embodiment, the compositioncomprises an anti-VEGF antibody or portion or variant thereof at aconcentration of about 5 mg/ml, 0.03% polysorbate 20, 5% sucrose, 40 mMsodium chloride, and 10 mM sodium citrate buffer (pH 5.0).

The active ingredient or agents (i.e., the novel anti-VEGF antibodies ofthe invention) may be administered at once, or may be divided into anumber of smaller doses to be administered at intervals of time. It isunderstood that the precise dosage and duration of treatment is afunction of the disease being treated and may be determined empiricallyusing known testing protocols or by extrapolation from in vivo or invitro test data. It is to be noted that concentrations and dosage valuesmay also vary with the severity of the condition to be alleviated. It isto be further understood that for any particular subject, specificdosage regimens should be adjusted over time according to the individualneed and the professional judgment of the person administering orsupervising the administration of the compositions, and that theconcentration ranges set forth herein are exemplary only and are notintended to limit the scope or practice of the claimed compositions.

Upon mixing or addition of the active agents, the resulting mixture maybe a solution, suspension, emulsion or the like. The form of theresulting mixture depends upon a number of factors, including theintended mode of administration and the solubility of the active agentsin the selected carrier or vehicle.

The pharmaceutical compositions are provided for administration tohumans and animals in unit dosage forms, such as sterile parenteralsolutions or suspensions, and injectable solutions or suspensionscontaining suitable quantities of the compositions of the invention oractive agent. The injectables, solutions and emulsions also contain oneor more excipients. Suitable excipients are, for example, polysorbate20, sucrose, sodium chloride, phosphate buffer, histidine buffer, sodiumcitrate buffer, water, saline, dextrose, glycerol or ethanol.

Liquid pharmaceutically administrable compositions can, for example, beprepared by dissolving, dispersing, or otherwise mixing an active agentas defined above and optional pharmaceutical adjuvants in a carrier orexcipient, such as, for example, water, saline, aqueous dextrose,glycerol, glycols, ethanol, and the like, to thereby form a solution orsuspension. If desired, the pharmaceutical composition to beadministered may also contain minor amounts of nontoxic auxiliarysubstances such as wetting agents, emulsifying agents, solubilizingagents, pH buffering agents and the like, for example, acetate, sodiumcitrate, cyclodextrine derivatives, sorbitan monolaurate,triethanolamine sodium acetate, triethanolamine oleate, and other suchagents.

Encompassed within the invention are also lyophilized powders, which canbe reconstituted for administration as solutions, emulsions and othermixtures. Reconstitution of this lyophilized powder with water forinjection provides a formulation for use in parenteral administration.For reconstitution, the lyophilized powder is added to sterile water orother suitable carrier. The precise amount depends upon the selectedcompound. Such amount can be empirically determined. These solutions,particularly those intended for ophthalmic use, may be formulated asabout 0.01% to 10% (vol %) isotonic solutions, pH about 5 to 7, withappropriate salts.

Kits

According to another aspect of the invention, kits are provided. Kitsaccording to the invention include package(s) comprising compositions ofthe invention.

The phrase “package” means any vessel containing compounds orcompositions presented herein.

In preferred embodiments, the package can be a box or wrapping.Packaging materials for use in packaging pharmaceutical products arewell known to those of skill in the art. Examples of pharmaceuticalpackaging materials include, but are not limited to, blister packs,bottles, tubes, inhalers, pumps, bags, vials, containers, syringes,bottles, and any packaging material suitable for a selected formulationand intended mode of administration and treatment.

The kit can also contain items that are not contained within the packagebut are attached to the outside of the package, for example, pipettes.

Kits may optionally contain instructions for administering active agentsor compositions of the present invention to a subject having a conditionin need of treatment. Kits may also comprise instructions for approveduses of compounds herein by regulatory agencies, such as the UnitedStates Food and Drug Administration. Kits may optionally containlabeling or product inserts for the present compounds. The package(s)and/or any product insert(s) may themselves be approved by regulatoryagencies. The kits can include active agents in the solid phase or in aliquid phase (such as buffers provided) in a package. The kits also caninclude buffers for preparing solutions for conducting the methods, andpipettes for transferring liquids from one container to another.

The kit may optionally also contain one or more other compositions foruse in combination therapies as described herein. In certainembodiments, the package(s) is a container for intravenousadministration. In other embodiments, compounds are provided in aninjectable means.

The present invention is not to be limited in scope by the embodimentsdisclosed herein, which are intended as single illustrations ofindividual aspects of the invention, and any which are functionallyequivalent are within the scope of the invention. Various modificationsto the models and methods of the invention, in addition to thosedescribed herein, will become apparent to those skilled in the art fromthe foregoing description and teachings, and are similarly intended tofall within the scope of the invention. Such modifications or otherembodiments can be practiced without departing from the true scope andspirit of the invention.

EXAMPLES Example 1

Identification and Molecular Characterization of Novel SyntheticAntibodies Directed Against VEGF

The overall process involves selection of Fab using phage displaytechnology, selection of clones followed by several rounds of affinitymaturation for selection of clones with highest binding affinity. Thesequences obtained are cloned in a Pho A-based vector followed byexpression in E. coli, protein purification and affinity determination.Detailed Protocols are below.

1. Phage Display Technology

Construction of Synthetic phage libraries is based on structural andfunctional characterization of naturally occurring antibodies,bacteriophage coat protein structure and assembly, bacteriophage biologyand host cell biology. Based such knowledge, infective bacteriophagesdisplaying synthetic Fab antibody fragments on the phage surface areproduced. For any single Fab phage display library, the synthetic Fabantibody fragment portion of the chimeric Fab-phage coat protein fusionprotein may have specific human framework region (FR) or human consensussequences FR to which complementarity determining region (CDR) loopswith various sequences or random sequences may be joined. Since the CDRsplays a critical role in binding to an antigen, the phages are screenedagainst an antigen, such as VEGF, to identify synthetic Fab phages thatbind VEGF and hence select out phages with the CDRs that play a role inbinding to VEGF. Improvements to VEGF-binding by the selected Fab phagesmay require directed mutagenesis of the selected CDRs and further roundsof phage selection. Alternatively, directed mutagenesis to the FRsequences may be performed especially for the amino acid residuesadjacent to a CDR sequence except for the cysteines that participate inintrastrand disulfide formation and highly conserved amino acids, suchas, for example, the invariant tryptophan of heavy chain FRH4 of humanIgG1.

Framework region or FR residues are those variable domain residues otherthan the hypervariable region residues, as herein defined. Since thedesignation of the hypervariable residues or CDRs sequences can differbetween Kabat method or IMGT® method for identifying CDRs, the sequencesof the framework regions may be different. In particular, the FRsequences between Kabat nomenclature and IMGT nomenclature may beidentical, overlapping, or contained within one or the other.

An acceptor human framework region (for the CDR sequences) comprises theamino acid sequence of a VL or VH framework region derived from a humanimmunoglobulin framework region, or from a human consensus frameworkregion. For example, using the Kabat nomenclature, the human frameworkregion sequences of the heavy chain variable region are: FRH1 comprisingglutamic acid at amino acid position 1 to phenylalanine at amino acidposition (SEQ ID NO: 1), FRH2 comprising tryptophan at amino acidposition 36 to alanine at amino acid position 49 (SEQ ID NO: 1), FRH3comprising arginine at amino acid position 67 to arginine at amino acidposition 98 (SEQ ID NO: 1) and FRH4 comprising tryptophan at amino acidposition 110 to serine at amino acid position 120 (SEQ ID NO: 1).

An acceptor human framework region derived from a human immunoglobulinframework or human consensus framework may comprise the same amino acidsequence thereof, or may contain amino acid sequence changes. Preferablyno more than 5 and preferably 4 or less, or 3 or less, amino acidchanges are present or made.

An example, using the Kabat nomenclature, the human framework regionsequences of the light chain variable region are: FRL1 comprisingaspartic acid at amino acid position 1 to cysteine at amino acidposition 23 (SEQ ID NO: 3), FRL2 comprising tryptophan at amino acidposition 35 to tyrosine at amino acid position 49 (SEQ ID NO: 3), FRL3comprising glycine at amino acid position 57 to cysteine at amino acidposition 88 (SEQ ID NO: 3) and FRL4 comprising phenylalanine at aminoacid position 98 to lysine at amino acid position 107 (SEQ ID NO: 3).

In the case of the framework region sequences identified by the IMGT®method for the same Fab heavy chain sequence (SEQ ID NO: 1), theIMGT®-defined framework region sequences of the heavy chain variableregion are: IMGT-defined FRH1 comprising glutamic acid at amino acidposition 1 to serine at amino acid position 25 (SEQ ID NO: 1);IMGT-defined FRH2 comprising isoleucine at amino acid position 34 totyrosine at amino acid position 50 (SEQ ID NO: 1); IMGT-defined FRH3comprising tyrosine at amino acid position 59 to cysteine at amino acidposition 96 (SEQ ID NO: 1), and IMGT-defined FRH4 comprising tryptophanat amino acid position 110 to serine at amino acid position 120 (SEQ IDNO: 1). In the case of the framework region sequences identified by theIMGT® method for the same Fab light chain sequence (SEQ ID NO: 3), theIMGT®-defined framework region sequences of the light chain variableregion are: IMGT-defined FRL1 comprising aspartic acid at amino acidposition 1 to serine at amino acid position 26 (SEQ ID NO: 3);IMGT-defined FRL2 comprising valine at amino acid position 33 totyrosine at amino acid position 49 (SEQ ID NO: 3); IMGT-defined FRL3comprising glutamic acid at amino acid position 53 to cysteine at aminoacid position 88 (SEQ ID NO: 3); and IMGT-defined FRL4 comprisingphenylalanine at amino acid position 98 to lysine at amino acid position107 (SEQ ID NO: 3).

In the variable region, the arrangement of the FRs and CDRs are:FRH1-CDRH1-FRH2-CDRH2-FRH3-CDRH3-FRH4 for the heavy chain variableregion and FRL1-CDRL1-FRL2-CDRL2-FRL3-CDRL3-FRL4 for the light chainvariable region.

The Fab phage display library is constructed in a filamentous phagevector system (such as M13 bacteriophage), a phagemid, which contains acoding sequence for an antibody light chain and a coding sequence for aFab antibody fragment heavy chain fused to a coat protein. Once thelibrary is constructed, it is transformed into E. coli and the phagemidsreplicate (using dsDNA origin, such as colE1) and expresses the antibodylight chain and the heavy chain-coat protein fusion protein. Onco-infection with helper phages (KO7), using the ssDNA origin, phagemidsreplicate as single stranded DNA packaged into virions decorated withheavy chain-coat fusion protein from the phagemid and wild-type coatprotein from the helper phage. The helper phages provide geneticinformation required for wild-type coat protein synthesis andreplication/packaging through the M13/f1 phage origin in the phagemid.

Phagemid virions are extruded from the host cell, and each phageparticle displays a unique antibody/Fab whose coding sequences areencapsulated within the phage particle. These phage particles arechallenged with VEGF protein, selected for VEGF binding, and amplifiedby infecting its bacterial host cells, permitting further Fabcharacterization and isolation of the Fab nucleic acid sequences.

Phagemid clones are further subjected to affinity maturation, whichincludes further fine tuning amino acid combinations in the antigenbinding regions, preparing libraries followed by phage-display library,screening, enrichment and validation. Several rounds of affinitymaturations might be essential to come up with clones having desiredaffinity.

From the billions of Fab pool, few (˜100) binders having highestaffinity to the desired antigen protein is screened in round one.Further enrichment of the clones is performed in an antigen-guidedfashion in subsequent rounds of selection, where from 100, we find bestbinders having good affinity (˜10). Best clones with best affinities(nM) are then sub-cloned into expression vector and expressed to screenout clones with best yield. The clones with good affinity and yield areselected, and based on the application, the affinity has to be furtherimproved to pM range.

The basic vector backbone is same for all the Fab constructs. Change isonly in the CDR. There are 3 such CDR regions. L chain—CDR-L1, L2 and L3and H chain—CDR-H1, H2 and H3. One or a combination of these CDR's arechanged to come up with billions of possibilities in the library

2. Cloning of Fab in Pho A-Based Vector

A DNA construct of 2140 bp was gene-synthesised, and this constructcomprised sequences of phoA promoter, Fab coding sequence of clone #121(Fab-A5) and rrnB terminator. The construct was cloned into the modifiedpBR322 vector at the EcoRI/NotI site to generate the clone #121. Clone#121 was subsequently modified by deletion of tet^(R) resistance gene of1454 bp size to generate the clone #131.

The DNA sequence of Fab-F8.y corresponding to the aminoacid region from8^(th) to 203^(rd) position was gene-synthesised and this DNA fragmentwas replaced into the clone #131 using standard cloning techniques, tomake the clone #201. It is to be noted that Fab 201 produced from clone#201 is identical in amino acid sequence to Fab FF03046-2 except for asingle amino acid change at amino acid 123 in the mature kappa lightchain constant region, wherein a glutamic acid in Fab FF03046-2 (seeFIG. 9C) is changed to a serine in clone #201 (see FIG. 16). Fab variant#216 derived from clone #201 has the same serine at amino acid 123 ofthe mature kappa light chain constant region (see FIG. 16),corresponding to amino acid 146 of an unprocessed, translated kappalight chain as provided in e.g. SEQ ID NO:16 or SEQ ID NO:17 with anamino terminal secretory signal extension. It is also noted that analternative coding sequence for Fab 216 is provided in FIG. 16.Schematic representation of the expression plasmids for anti-VEGF Fab201 and anti-VEGF Fab 216 are provided in FIGS. 17 and 18.

3. Transformation & Expression of Recombinant Fab

Transformation of recombinant Fab was done in E. coli Dh5α & BL21.

Glycerol Stock Revival

Glycerol vials from −80° C. are thawed in ice for 10 mins. 50 μlCarbenicillin from 100 mg/ml or Ampicillin 100 mg/mi is added to 50 mlof Luria Broth (LB). 7 μl of thawed glycerol stock culture was taken andinoculated in 50 ml LB broth with antibiotic. The culture was grown inincubator shaker for overnight at 37° C. and 210 rpm.

Plasmid Isolation

5 ml of overnight grown culture is taken and the plasmid is isolatedusing Qiagen QiAprep Spin Miniprep Kit (Catalog Number: 27104).

Competent Cell Preparation:

Bacteria from frozen stock are plated with adequate antibiotic(Carbencillin/Ampicillin). A single colony is picked and cells are grownin LB with antibiotic till the OD at 600 nm reaches 0.4-0.6. Culture isspin down for 10 min at 4000 g at 4° C. The pellet is resuspended in1/20 volume of TSB at 4° C. Cells are incubated on ice for 10 min andadded 10% sterile glycerol final concentration. Cells are aliquoted inindividual tubes (100 ul of cells) and frozen in liquid nitrogen or dryice. Tubes are stored at −80° C.

Transformation

Diluted DNA is mixed with 10 μl of 1×KCM in 1.5 mL tube. Tube is chilledon ice for 2-5 mins before adding the same volume of competent cells (10ul). Tube is further incubated on ice for 20 mins, and then incubated atroom temperature for 10 mins. 200 ul of Super Optimal Broth withCatabolite Repression (SOC) or LB medium (ThermoFisher) is added and thecells are allowed to recover by shaking at 37° C. for 1 hour. 100-200 ulof above culture is taken, grown on LB agar plate with adequateantibiotic (Carbencillin/Ampicillin) for overnight at 37° C.

Master Cell Bank Preparation from Transformants

Pre-Inoculum is prepared (LB medium pH 7.0, 10 mL+10 μl Carbencillinfrom 100 mg/ml stocks). The culture is grown overnight at 37° C./210rpm. 1 mL overnight grown culture is subcultured in 100 mL fresh LBmedium (100 mL LB medium, pH 7.0+100 μl Carbencillin from 100 mg/mlstocks). Culture is grown at 37° C./210 rpm till OD₆₀₀ reaches between0.4 to 0.6. Culture is spun at 4000 rpm under sterile conditions. Thepellet is resuspended in 6 mL sterile LB medium pH 7.0+4 mL, 50% sterileglycerol in the ratio of 60:40 (grown culture:glycerol) under sterileconditions. Multiple glycerol stocks are prepared and stored first at−20° C. and then later transferred to −80° C. The glycerol stocks arerevived periodically.

Pre-Inoculum Preparation:

Single colony of freshly transformed 201 in E. coli BL21 from LB agarplate was picked. E. coli BL21-201 was inoculated in LB broth (10 mL)contains carbenicillin antibiotic (10 μl). The culture was kept inorbital shaker at 37° C. at 210 rpm for 16 hrs. OD of the culture at 600nm was checked after 16 hrs.

Growth and Induction in Minimal Medium:

500 mL growth and production medium were prepared. The medium pH wasadjusted to 7.0. Before inoculation, 500 μL carbenicillin (from 100mg/mL stocks), 500 μL Thiamine HCL (from 1M sterile stocks), 2.5 mLsterile glucose (from 40% sterile stocks) and 320 μL potassium phosphate(from 1M KH₂PO₄) were added. The growth medium was inoculated with 8% ofovernight grown culture (Pre-inoculum). The initial 01) (at 600 nm),Glucose concentration and Phosphate concentration of the culture in theGrowth medium were checked simultaneously. The culture flask was kept inorbital shaker at 37° C. at 210 rpm till OD reach in between 2-2.5. TheOD (at 600 nm) was checked to estimate glucose concentration andphosphate concentration of the culture in the growth medium. The culturewas spun at 4000 rpm, +25° C. for 15 mins. The cell pellet was washed insterile condition and spun at 4000 rpm for 15 mins. The cell pellet wasresuspended in 500 mL production medium with low phosphate concentration(0.064 mM working concentration). The production culture flask was keptat 30° C. at 210 rpm for 20 hrs. Simultaneously, the OD (at 600 nm),WCW, DCW, glucose and phosphate concentration of the culture in theproduction medium were analyzed. Expressed culture was spun at 4300 g at+4° C. for 30 mins.

Purification of Fab

Process Followed for the Extraction of Protein from 100 ml Culture

Bacterial pellet lysis was carried out using 20 mM phosphate buffercontaining 140 mM Sodium chloride and 1 mM phenyl methane sulfonylfluoride (PMSF). For a 20 g pellet from a 100 ml culture, 4 L of lysisbuffer was used. Pellet wash was given using 2 L of lysis buffer whereinthe pellet was suspended and centrifuged at 4,300 g for 15 minutes at 4°C. The pellet was then suspended in 2 L of lysis buffer at 4° C. andpreheated for 5 minutes at 65° C. water bath. After a short mixing step,Triton X 100 was added in a ratio of 0.1% and mixed for 5 minutes. Thesuspension was then transferred to water bath maintained at 65° C. for40 minutes followed by chilling of the lysate on ice.

Clarification of pellet was done by centrifuging the lysate at 4,300 gfor 10 minutes and further clarifying the supernatant at 17,000 g for 30minutes at 4° C. The final supernatant was filtered through 0.45 μm PESmembrane filter. The filtrate was purified through Capto L (GE) affinitychromatography, in which fab was eluted with 0.2 M Glycine-HCl buffercontaining 2% sucrose at pH 2.0. The eluted fab was immediatelyneutralized with 1.5 M Tris-Ci buffer of pH 8.8. The neutralized fab wasexchanged with 20 mM phosphate buffer of pH 6.0 followed by endotoxinremoval through Cellufine ET Clean L resin. Purified fraction wasanalysed quantitatively by Bradford assay and qualitatively by reducingand non-reducing SDS-PAGE using Silver staining and active protein wasanalysed using ELISA. The level of endotoxin was analysed using ThermoScientific Pierce LAL kit.

The BSA standard curve (FIG. 1) for the quantification through Bradfordmethod was done as follows. The BSA samples were serially diluted inorder to make concentrations ranging from 50 ug/ml to 500 ug/ml.Briefly, for the assay, 10 ul of each standard was mixed with workingBradford reagent, incubated for 5 min at room temperature and absorbancemeasured at 595 nm in multi-plate reader.

TABLE 1 Table used for plotting standard curve in FIG. 1 Conc. BSA ug/mlOD at 595 50 0.07 100 0.14 250 0.26 375 0.39 500 0.53

Yield Quantitation & Activity Determination for Purified Fab

For quantification of yield of Fab from the expressed clones in shakeflask & after purification. Standard Curve of Lucentis was prepared &was used for determination of the concentration of Fab in cell lysatesand the eluate after column chromatography (protein purification).

Quantitative ELISA Protocol

Buffers were prepared (Wash Buffer (PT), Dilution Buffer (PBT) andBlocking Buffers). VEGF-121 (human VEGF-A₁₂₁) was used to coat Nunc 96well MaxiSorp plates at a final concentration of 50 ng/100 ul per wellfor 2 hrs at PBS with mild shaking. hVEGF was removed from coatedplates. 200 ul of blocking buffer was added, and the plate was incubatedfor 1 hr at RT with mild shaking. Blocking Buffer was removed by dumpingon filter paper. Plates were washed 3 times with 200 ul Wash Buffer.From a stock solution of 20 ug/ml, Lucentis® (ranibizumab; Novartis andRoche) was diluted to 500 ng/ml in Dilution Buffer. Using the 500 ng/mlof the diluted Lucentis®, a series of serial dilutions of Lucentis® wasperformed to obtain diluted Lucentis® at: 200 ng/ml, 100 ng/ml, . . . ,0.39 ng/ml. 100 ul of the serially diluted Lucentis® was added to a wellin triplicates, and the plate incubated for 1 hr, RT with mild shaking.Solution in the wells of the plates were dumped, and the plates arewashed 3× with 200 ul of Wash buffer. 100 ul of anti-kappa light chainantibody-HRP conjugate (1:5000 in Dilution Buffer) was added andincubated for 1 hr at RT. Plates were washed 3× with Wash Buffer and 2×with PBS and dumped on filter paper to remove the buffer completely. 100ul of TMB substrate was added to each well, and colorimetric reactionwas allowed to develop for 5 minutes. 100 ul of 1N sulfuric acid wasadded to stop the reaction. The plates were read in a Multimode plateReader at 450 nm. For unknown samples, several dilutions are made andthe values are extrapolated using standard curve (FIG. 2 and Table 2).

TABLE 2 Values used for plotting standard curve (Quantitative ELISA) inFIG. 2 Conc. ng/ml OD-450 nm 0 0 0.244 0.09 0.488 0.18 0.976 0.38 1.9520.69 3.904 1.41 7.808 2.75

Affinity Assay

The steps in the affinity assay are as follows. Buffers were prepared(Wash Buffer (PBST), Dilution Buffer (PBT), Blocking Buffer and StopBuffers). Wells of a Nunc 384 well plate were coated with hVEGF in PBSat final concentration of 50 ng/25 ul per well for 2 hrs at 150 rpm, RT.After two hours, hVEGF was removed from the coated plate. 75 ul ofblocking buffer was added and incubated for 1 hr at 200 rpm, RT withmild shaking. Blocking Buffer was removed and the plate was washed 6×with 75 ul of PBST and tapped dry on a tissue towel. In the meantime, ina non-stick plate/Eppendorf hVEGF starting conc. 2× (100 nM, 50 nM, 25nM, 12.5 nM, 6.25 nM . . . ) were prepared in PBT so that final conc ofVEGF X is 50 nM, 25 nM, 12.5 nM, 6.25 nM . . . ). 200 pM Lucentis (2×)Fab was prepared in PBT so that final X concentration is 100 pM. 50 ulof 100 pM hVEGF (2×) (100 nM, 50 nM, 25 nM, 12.5 nM, 6.25 nM . . . ) wasmixed with 50 ul of 200 pM Lucentis (2×) so that final conc X is (50 nM,25 nM, 12.5 nM, 6.25 . . . ) and incubated for 1 hr at 200 rpm, RT withmild shaking. Similar steps were followed for Fab molecule also. 25 ulof this serially diluted hVEGF/Fab mixture was added to the plate andincubated for 30 mins at 200 rpm, RT with mild shaking. Primary Antibodynot immobilized on the plate was removed and the plate was washed 6×with 75 ul of PBST and tapped dry on a tissue towel. 25 ul anti-kappalight chain HRP (1:5000 in PBT) was added and incubated for 45 mins at200 rpm, RT with mild shaking. Secondary antibody not immobilized on theplate was removed and the plate was washed 6× with 75 ul of PBST and 2×with PBS in each well and tapped dry on a tissue towel. 25 ul of TMBsubstrate was added and incubated for 5 mins at 200 rpm, RT with mildshaking. 25 ul 1N sulfuric acid was added to the plate to stop thereaction. Plate was read at 450 nm in Multimode Plate Reader (See FIG. 3and Table 3).

TABLE 3 Fab ID Ranibizumab Fab 201 Kd (pM) 475 ± 36 110 ± 14

Competitive-ELISA Using hVEGF-165 Quantikine® ELISA Human VEGFImmunoassay Kit (R&D Systems, Inc.)

Briefly, 10 pM of hVEGF-165 was incubated with serial dilutions ofanti-VEGF antibody as described in the figure legend. Pre-formedhVEGF-165/anti-VEGF antibody complexes along with any unbound hVEGF-165in the binding solution are transferred into a 96-well polystyrenemicroplate coated with a monoclonal antibody specific for human VEGF, asprovided in the Quantikine® ELISA Human VEGF Immunoassay (R&D Systems,Inc.; Catalog Number: SVE00). hVEGF-165 bound to the plate is detectedusing a polyclonal anti-hVEGF antibody conjugated to horseradishperoxidase and tetramethylbenzidine as a chromagen to quantify hVEGF-165bound to the plate as provided in the Quantikine® assay kit. Kdcalculated from the data fitted with a 5 parameter asymmetric model withPrism software.

The following are the coding sequences of Promoter-phoA, Fab-F8.y andTerminator-rrnB.

Promoter-phoA (SEQ ID NO: 15)GACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAAAAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTTATAGTCGCTTTGTTTTTATTTTTTAATGTATTTGTAACTAGTACGCAAGTTCACGTAAAAAGGGTATGTAGAGGTTGAGGTGATTTT Coding sequence of Fab-F8.y(SEQ ID NO: 16)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGGACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAAGAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTCAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAATerminator-rrnB (SEQ ID NO: 19)CGTTTTACAACGTCGTGACTGGGAAAACATCCATGCGTTAACGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGTGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTNucleic acid sequence of pBR322 (GenBank Accession No:J01749.1) from nucleotide position 1353 to 4361 in whichthe tetracycline resistance gene of pBR322 has been deleted(SEQ ID NO: 20) GAATGCGCAAACCAACCCTTGGCAGAACATATCCATCGCGTCCGCCATCTCCAGCAGCCGCACGCGGCGCATCTCGGGCAGCGTTGGGTCCTGGCCACGGGTGCGCATGATCGTGCTCCTGTCGTTGAGGACCCGGCTAGGCTGGCGGGGTTGCCTTACTGGTTAGCAGAATGAATCACCGATACGCGAGCGAACGTGAAGCGACTGCTGCTGCAAAACGTCTGCGACCTGAGCAACAACATGAATGGTCTTCGGTTTCCGTGTTTCGTAAAGTCTGGAAACGCGGAAGTCAGCGCCCTGCACCATTATGTTCCGGATCTGCATCGCAGGATGCTGCTGGCTACCCTGTGGAACACCTACATCTGTATTAACGAAGCGCTGGCATTGACCCTGAGTGATTTTTCTCTGGTCCCGCCGCATCCATACCGCCAGTTGTTTACCCTCACAACGTTCCAGTAACCGGGCATGTTCATCATCAGTAACCCGTATCGTGAGCATCCTCTCTCGTTTCATCGGTATCATTACCCCCATGAACAGAAATCCCCCTTACACGGAGGCATCAGTGACCAAACAGGAAAAAACCGCGCTTAACATGGCCCGCTTTATCAGAAGCCAGACATTAACGCTTCTGGAGAAACTCAACGAGCTGGACGCGGATGAACAGGCAGACATCTGTGAATCGCTTCACGACCACGCTGATGAGCTTTACCGCAGCTGCCTCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTAAGCGGATGCCGGGAGCAGACAAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCGCAGCCATGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTECATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTGCAGGCATCGTGGTGTCACGCTCGTCGTTTGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGCCCGGCGTCAACACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTTTTCAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGACATTAACCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTCTTCAAGAATTC

Example 2

First Generation Anti-VEGF Fab Selection—Naïve Antibody LibrarySelection and Cross-Species Reactivity and Specificity of Selected Fabs.

The antibody fragment (Fab) phage library F (H. Persson, Et. al., J MolBiol, vol. 425, no. 4, pp. 803-811, 2013.) was selected againstrecombinant human vascular endothelial growth factor (hVEGF) 121 fromPreprotech (catalog number 100-20A). Fabs were screened for binding tomouse VEGF (mVEGF) from Preprotech (catalog number 450-32) and to hVEGFand for absence of binding to antibody crystallisable fragment (Fc) andto bovine serum albumin (BSA). A total of 7 Fabs were selected, 6 ofthem (referred as FF0124-1, FF0124-3, FF0124-4, FF0124-5, FF0124-6 andFF0124-7) bind to both hVEGF and mVEGF and not to Fc and BSA. Theaffinity of these Fabs for hVEGF was estimated by Fab-ELISA (FIG. 4).

Ability of the Fabs to Block hVEGF Binding to hVEGF Receptor, FLT andAffinity Ranking.

FLT is one of VEGF natural receptors. The 6 Fabs bind less hVEGF whenpreincubated with FLT (FIG. 5), which suggests that the 6 Fabs and FLThave overlapping binding sites on hVEGF, and that they have thepotential to inhibit FLT binding to hVEGF. Five Fabs were used as atemplate to make libraries based on FF0124-1, FF0124-3, FF01244,FF0124-6 and FF0124-7 sequences. These libraries were selected forhigher affinity for hVEGF.

Second Generation Anti-VEGF Fab Selection—Affinity Maturation of FirstGeneration Anti-VEGF Antibodies.

The next generation libraries were based on Fabs FF0124-1, FF0124-3,FF0124-4, FF0124-6 and FF0124-7. The diversity of each library rangedfrom 1×10⁹ to 4×10⁹. The five libraries were pooled (total diversity of10¹⁰) and produced as previously described. The pooled Fab-phage librarywas then selected, and the sequence of selected clones ranked by theirestimated affinity is reported in FIG. 6. Based on the 10 nM singlepoint competition ELISA, Fabs FF0158-C4, FF0158-F11 and FF0158-C11 bindhVEGF with the lowest affinity. These were produced in bacteria assoluble proteins as described previously. Affinities for hVEGF insolution were measured by competitive Fab-ELISA (FIG. 7).

The yield of production of FF0158-C4 and C11 were 5 to 10 times lowerthan usually observed. To identify which amino acid position isresponsible for this drop in production yield, we replaced each one ofFF0158-C4 and FF0158-C11 CDR sequences by the CDR sequence of a highyield Fab, an anti-maltose-binding-protein (MBP)-antibody. Both CDR-H1and CDR-H2 when mutated back to the anti-MBP Fab CDR respectivesequences restored yields of FF0158-C4 production to normal level.

Third Generation Anti-VEGF Fab—Affinity Maturation and Yield Improvementof Second Generation Anti-VEGF Antibodies

Since the mutation of CDR-H1 or CDR-H2 can improve the production yieldof FF0158-C4, we generated two different libraries with diversityfocused on CDR-H1 and CDR-H2. The libraries were built from the anti-MBPFab phagemid with a pTac promoter and an amber stop between the heavychain and the pIII coding sequence. In this format, Fabs are displayedon phage when expressed in an Amber suppressor bacterial strain andsecreted in soluble form when expressed in a non-Amber suppressorbacterial strains. Phage displayed Fabs were selected for affinity,while secreted Fabs were screened for protein yield.

In order to generate Fab displaying phage particles, phage producedafter electroporation by SR320 were infected into the amber stopsuppressor strain, Omnimax™ (Thermo Fisher Scientific). The library witha 9×10⁹ diversity was selected for binding to hVEGF-121, and clones werescreened for production yield improvement in small scale bacterialculture. Interestingly, the two Fabs with the greatest yield improvement(Fabs FF0188-H5/FF01088-B10 and FF0188-F12) carry a phenylalanine tohistidine amino acid mutation at the heavy chain CDR-H1 (as defined inthe Kabat® numbering). A phenylalanine residue at position 31 (FabFF0188-A9 and FF0188-A2) does not lead to a large yield improvement (2and 3 fold improvement, respectively), as shown in FIG. 7. Thethermostability is identical for all three Fabs: FF0158-C4, FF0188-F12and FF0188-H5: 74.5° C.

Fourth Generation Anti-VEGF Fab—Affinity Maturation and YieldImprovement of Third Generation Anti-VEGF Antibodies

In order to affinity improve the yield-improved anti-VEGF Fab FF0188-H5,we designed a new library with FF0188-H5 sequence as a template. Stopcodons in the diversified CDR were added to the template to limit thenumber of parental sequence in the two libraries.

The diversity of the library was 6×10⁹. The phage library was amplifiedin the amber suppressor strain Omnimax™, to be able to produce phagedisplayed Fabs. The library was then selected against hVEGF-121, and 64selected clones were screened by single point competitive phage-ELISA.The 20 clones that showed the lowest residual binding after 1 nM hVEGFcompetition were sequenced and characterized (FIG. 8 shows the sequenceand further characterization of the 9 unique clones). FF0117-A5 has a5.4 mg per liter yield, an affinity of 80+/−40 pM for hVEGF, a Tm of 77°C. FF0117-A5 is superior to ranibizumab in terms of affinity and thermalstability: the affinity of FF0117-A5 in competitive Fab-ELISA is 4 to 15times higher than ranibizumab and the Tm of FF0117-A5 is 3.5° C. higher.

Fifth Generation Anti-VEGF Fab—Affinity Maturation of Fourth GenerationAnti-VEGF Antibodies

In order to further affinity improve anti-VEGF Fab FF0117-A5, wedesigned a new library with FF0117-A5 sequence as a template: FF0117-A5was mutagenized to introduce stop codons in CDR-L1 and CDR-L2, and tomodify the sequence coding for the C-terminal end of the HC of the Fab,to allow monovalent display instead of bivalent display. The librarydiversity is 6×10⁹. 10¹⁰ phage particles were used to infect 500 mL ofthe amber-suppressor strain Omnimax™ culture to make Fab display phageparticles.

Library FF01159-1 was selected, and Fab-phage clones that showed bindingto hVEGF were sequenced and produced as soluble Fabs (FIG. 9). Sincelibrary FF01159-1 was designed with a deletion of one residue near theend of CDR-L2 (Kabat), the selected Fabs FF03033-4 and FF03033-8 weremutagenized to reintroduce previously deleted tyrosine residue back atthe deleted position. The resulting Fabs are named FF03046-1 andFF03046-2. Fab FF03046-2 CDR sequence, thermal stability, productionyield and binding affinity for hVEGF are shown in FIG. 9. The ability ofFF03046-2 Fab to block hVEGF-dependent human vascular endothelium cells(HUVEC) proliferation is reported in FIG. 10. 260 pM of hVEGF-165 wasused in the HUVEC proliferation assay. The EC50 of FF03046-2 (200pM+/−10 pM) is below the concentration of hVEGF-165 used in the assay,meaning that the EC50 of FF03046-2 could actually be underestimated bythis HUVEC assay. The affinity of FF03046-2 Fab for hVEGF was alsomeasured in solution. hVEGF-165 was used and detected with a Quantikineassay. This allowed us to lower the working concentration of hVEGF to 5pM (FIG. 11). In this assay, the affinity of FF03046-2 for hVEGF-165 iswell below Ranibizumab. (90 pM+/−20 pM versus 390 pM+/−50 pM).

C-Terminal Fc Fusion of Anti-VEGF scFv and Fab.

We have then fused the scFv or Fab version of FF03046-2 onto theC-terminus of a human Fc. We expect the fusion proteins to have slowerclearance, higher affinity because of their ability to clamp a singlemolecule of VEGF with each one of the Fab/scFv fused to the C-terminalof the Fc. This facilitates the generation of multispecific entities, asthe N-terminus of the Fe can be fused with a scFv or Fab to bind otherproteins of interest.

The sequence of the Fab and scFv Fc fusions are shown in FIGS. 12 and13, respectively. The affinities of the Fab and scFv fusions forhVEGF-165 in comparison with other anti-VEGF proteins are shown in FIG.14. The affinity of FF03077-4 and FF03092-1 for hVEGF is similar to theone of the Fab FF03046-2. The sequence of the full length IgG version ofFab FF0346-2 (FF03092-3) is shown in FIG. 15.

Taken together, FF03092-1, FF03077-4, and FF03046-2 are three differentanti-VEGF entities that could have different pharmacokinetic profilesthat could translate into different efficacy in vivo. In order tofurther improve the solubility and yield of production of FF03046-2,several variants (e.g., sequences shown in Example 3) were designed tobe tested for production yield, solubility and hVEGF binding affinity.

Example 3

SEQUENCE OF Y VARIANTS Variant 201 (SEQ ID NO: 2)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTGACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTGACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCCTTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCACCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 202 (SEQ ID NO: 22)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCGACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTCCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATGTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCGATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGCACAAAACTCACA CATAAVariant 203 (SEQ ID NO: 23)ATGAAAAAGAATATCGCATTTCTTCTTGCATTCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGATCTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGTCCTCTTGTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTYTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCCTGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCCTTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCCTTGGAACTCAGGCCTCCCTGACCAGCGGCGTGCACACCTTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 204 (SEQ ID NO: 24)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCAGACGAACTCTACGCCCTGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGGAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 205 (SEQ ID NO: 25)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGATTCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 206 (SEQ ID NO: 26)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACGATGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGaiCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACCTGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 207 (SEQ ID NO: 27)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTGACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGAGAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAACTTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCACACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 208 (SEQ ID NO: 28)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCGATGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 209 (SEQ ID NO: 29)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGATGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAAGTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTTGTTGTCTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCA CACATAAVariant 212 (SEQ ID NO: 30)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCCTCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGCAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACCTAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGACTCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATAGACTGGGTGCGTCAGGCCCCGGGTAAGGCCTGGAATGGGTTGCATACATTTACCCCTTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAACTAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCAC ACATAAVariant 213 (SEQ ID NO: 31)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCCTGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGGTTCTGGCTTCGATTTATTTCATTATGATATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCAC ACATAAVariant 214 (SEQ ID NO: 32)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATGATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCGAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCAC ACATAAVariant 215 (SEQ ID NO: 33)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCACTTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTGATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCAC ACATAAVariant 216 (SEQ ID NO: 34)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATGCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTAGATCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCAC ACATAAVariant 217 (SEQ ID NO: 35)ATGAAAAAGAATATCGCATTTCTTCTTGCATGTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGACGCCTACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTGTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAACTGGCCGTTTCACTATAAGCGCACTACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGCKTGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTCTGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGAATACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 218 (SEQ ID NO: 36)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCGACGGCCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTVTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCCTTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 219 (SEQ ID NO: 37)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGGAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGACCGCGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTGTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTCTAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGGGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTCTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAAVariant 220 (SEQ ID NO: 38)ATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAATGCCTATGCAGATATCCAGATGACCCAGTCCCCGAGCTCCCTGTCCGCCTCTGTGGGCGATAGGGTCACCATCACCTGCCGTGCCAGTCAGGCCGCCTACGGCGACGTAGCCTGGTATCAACAGAAACCAGGAAAAGCTCCGAAGCTTCTGATTTACAAAGCATCCGAACTCTACGCCGGAGTCCCTTCTCGCTTCTCTGGTAGCCGTTCCGGGACGGATTTCACTCTGACCATCAGCAGTCTGCAGCCGGAAGACTTCGCAACTTATTACTGTCAGCAACGTGGCTGGTATCTGTTCACGTTCGGACAGGGTACCAAGGTGGAGATCAAACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCGCCATCTGATTCACAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTTCTATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCCTCAGCAGCACCCTGACGCTGAGCAAAGCAGACTACGAAAAACATAAAGTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAAGAGCTTCAACAGQGGAGAGTGTTAATACTCGAGGCTGAGCAAAGCAGACTACTAATAACATAAAGTCTACGCCGGACGCATCGTGGCCCTAGTACGCAAGTTCACGTAAAAAGGGTAACTAGAGGTTGAGGTGATTTTATGAAAAAGAATATCGCATTTCTTCTTGCATCTATGTTCGTTTTTTCTATTGCTACAAACGCGTACGCTGAGGTTCAGCTGGTGGAGTCTGGCGGTGGCCTGGTGCAGCCAGGGGGCTCACTCCGTTTGTCCTGTGCAGCTTCTGGCTTCGATTTATTTCATTATTCTATACACTGGGTGCGTCAGGCCCCGGGTAAGGGCCTGGAATGGGTTGCATACATTTACCCGTCTTATGGCTATACTTATTATGCCGATAGCGTCAAGGGCCGTTTCACTATAAGCGCAGACACATCCAAAAACACAGCCTACCTACAAATGAACAGCTTAAGAGCTGAGGACACTGCCGTCTATTATTGTGCTCGCCATGCGTGGTATTATGGGTGGGGTTTGGACTACTGGGGTCAAGGAACCCTGGTCACCGTGTCCTCGGCCTCCACCAAGGGTCCATCGGTCTTCCCCCTGGCACCCTCCTCCAAGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAGCGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACCCTACTCCCTCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTCGACAAGAAAGTTGAGCCCAAATCTTGTGACAAAACTCACA CATAA

Immunoglobulin light chain and heavy chain fragments encoded by thenucleic acid sequences of the Y variants above are shown in FIGS. 4,6-9, and 12-16 along with the CDRs as defined by Kabat or IMGT®nomenclatures.

The Fab variants based on the Fab produced by Clone #201 showed avariety of binding affinities for VEGF-165 as shown below in Table 4.Two of the variants (SI. No. 3 and 9) showed a higher affinity for humanVEGF-165 isoform than the starting Fab of Clone #201, indicating thatfurther improvement in the Kd of the Fab for VEGF may be obtained, asthese two variants have Kd values of about 12 pM and 14 pM.

Fab variant 216 derived from mutagenesis of Clone #201 has a singleamino acid change from a phenylalanine to an aspartic acid residue inthe heavy chain CDR1 sequence (as defined by IMGT® method) such thatGFDLFHYS, CDR-H1 of Fab 201 from Clone #201, is GFDLDHYS, CDR-1-H1 ofFab variant 216. As shown in FIGS. 19 and 20 and Table 4, presence ofthe phenylalanine to aspartic acid change in Fab 216 reduces its bindingaffinity for VEGF slightly, compared to the parental Fab 201 (Kd ofapproximately 35±4 pM for Fab 216 versus 25±2 pM for Fab 201; see Table4), but like Fab 201, the dissociation constant Kd of Fab 216 is about5-16× less than the Kd of Lucentis (see FIGS. 19 and 20).

TABLE 4 Kd VALUES OF CLONE #201 VARIANTS Quantikine kit(VEGF-165)-10 pMVEGF Y variants Kd(pM) 201 25 ± 2 205 62 206 14 209 28 212 1276  213 91215 27 216 35 ± 4 219 12 220 26 Lucentis 591 ± 60

The sequence alignment for the V variants are shown below in Tables5a-d.

TABLE 5aMultiple sequence alignment for light chain of variants 201-220 as indicated in right-hand column (CDR sequences defined in accordance with IMGT ® are underlined)201  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59202  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59203  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59204  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59205  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59206  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59207  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59208  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59209  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQDAAYGRVAWY   60212  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59213  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59214  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59215  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59216  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59217  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-DAYGRVAWY   59218  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AADGRVAWY   59219  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYDRVAWY   59220  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGDVAWY   59     ********************************************** ***  * . ****201  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119202  QQKPGKAPKLLIYKASELDAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119203  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119204  QQKPGKAPKLLIYKADELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119205  QQKPGKAPKLLIYKDSELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119206  QQKPGKAPKLLIYDASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119207  QQKPGKAPKLLIDKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119208  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119209  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119212  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119213  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119214  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119215  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119216  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119217  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119218  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119219  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119220  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119     ************ . .:* *****************************************201  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179202  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179203  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179204  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179205  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179206  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179207  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179208  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179209  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  180212  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179213  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179214  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179215  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179216  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179217  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179218  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179219  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179220  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179     ************************************************************201  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237202  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237203  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237204  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237205  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237206  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237207  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237208  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237209  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    238212  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237213  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237214  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237215  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237216  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237217  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237218  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237219  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237220  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237     **********************************************************

TABLE 5b Multiple sequence alignment for heavy chain of variants 201-220 as indicated in right-hand column (CDR sequences defined in accordance with IMGT ® are underlined)201  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60202  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60203  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60204  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60205  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60206  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60207  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60208  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60209  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60212  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60213  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYDIHWV   60214  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHDSIHWV   60215  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFDYSIHWV   60216  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLDHYSIHWV   60217  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60218  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60219  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60220  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60     **************************************************** . .*.**201  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120202  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120203  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120204  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120205  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120206  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120207  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120208  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120209  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120212  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120213  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120214  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120215  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120216  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120217  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120218  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120219  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120220  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120     ************************************************************201  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180202  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180203  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180204  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180205  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180206  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180207  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180208  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180209  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180212  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180213  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180214  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180215  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180216  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180217  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180218  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180219  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180220  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180     ************************************************************201  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240202  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240203  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240204  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240205  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240206  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240207  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240208  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240209  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240212  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240213  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240214  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240215  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240216  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240217  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240218  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240219  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240220  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240     ************************************************************201  VEPKSCDKTHT  251 202  VEPKSCDKTHT  251 203  VEPKSCDKTHT  251204  VEPKSCDKTHT  251 205  VEPKSCDKTHT  251 206  VEPKSCDKTHT  251207  VEPKSCDKTHT  251 208  VEPKSCDKTHT  251 209  VEPKSCDKTHT  251212  VEPKSCDKTHT  251 213  VEPKSCDKTHT  251 214  VEPKSCDKTHT  251215  VEPKSCDKTHT  251 216  VEPKSCDKTHT  251 217  VEPKSCDKTHT  251218  VEPKSCDKTHT  251 219  VEPKSCDKTHT  251 220  VEPKSCDKTHT  251

TABLE 5c Multiple sequence alignment for light chain of variants 201-220 as indicated in right-hand column (CDR sequences defined in  accordance with Kabat are underlined)201  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59202  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59203  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59204  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59205  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59206  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59207  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59208  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCDASQ-AAYGRVAWY   59209  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQDAAYGRVAWY   59212  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59213  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59214  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59215  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59216  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59217  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-DAYGRVAWY   59218  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AADGRVAWY   59219  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYDRVAWY   59220  MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQ-AAYGRVAWY   59     ********************************************** ***  * . ****201  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119202  QQKPGKAPKLLIYKASELDAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119203  QQKPGKAPKLLIYKASDLYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119204  QQKPGKAPKLLIYKADELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119205  QQKPGKAPKLLIYKDSELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119206  QQKPGKAPKLLIYDASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119207  QQKPGKAPKLLIDKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119208  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119209  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  120212  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119213  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119214  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119215  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119216  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119217  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119218  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119219  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119220  QQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLF  119     ************ . .:* *****************************************201  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179202  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179203  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179204  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179205  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179206  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179207  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179208  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179209  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  180212  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179213  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179214  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179215  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179216  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179217  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179218  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179219  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179220  TFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS  179     ************************************************************201  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237202  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237203  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237204  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237205  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237206  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237207  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237208  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237209  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    238212  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237213  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237214  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237215  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237216  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237217  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237218  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237219  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237220  GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC    237     **********************************************************

TABLE 5d  Multiple sequence alignment for heavy chain(CDR sequences defined in accordance with Kabat are underlined)201  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60202  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60203  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60204  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60205  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60206  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60207  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60208  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60209  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60212  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIDWV   60213  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYDIHWV   60214  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHDSIHWV   60215  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFDYSIHWV   60216  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLDHYSIHWV   60217  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60218  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60219  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60220  MKKNIAFLLASMFVFSIATNAYAEVQLVESGGGLVQPGGSLRLSCAASGFDLFHYSIHWV   60     **************************************************** . .*.**201  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120202  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120203  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120204  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120205  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120206  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120207  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120208  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120209  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120212  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120213  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120214  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120215  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120216  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120217  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120218  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120219  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120220  RQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCA  120     ************************************************************201  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180202  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180203  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180204  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180205  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180206  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180207  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180208  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180209  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180212  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180213  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180214  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180215  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180216  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180217  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180218  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180219  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180220  RHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV  180     ************************************************************201  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240202  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240203  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240204  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240205  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240206  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240207  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240208  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240209  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240212  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240213  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240214  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240215  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240216  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240217  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240218  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240219  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240220  TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK  240     ************************************************************201  VEPKSCDKTHT  251 202  VEPKSCDKTHT  251 203  VEPKSCDKTHT  251204  VEPKSCDKTHT  251 205  VEPKSCDKTHT  251 206  VEPKSCDKTHT  251207  VEPKSCDKTHT  251 208  VEPKSCDKTHT  251 209  VEPKSCDKTHT  251212  VEPKSCDKTHT  251 213  VEPKSCDKTHT  251 214  VEPKSCDKTHT  251215  VEPKSCDKTHT  251 216  VEPKSCDKTHT  251 217  VEPKSCDKTHT  251218  VEPKSCDKTHT  251 219  VEPKSCDKTHT  251 220  VEPKSCDKTHT  251     ***********

SEQUENCES in Table 5a-5d Sequence Listing Amino Acid Sequence (LightChain) of Variant 201 SEQ ID NO: 17 found in Table 5A and 5C Amino AcidSequence (Light Chain) of Variant 202 SEQ ID NO: 95 found in Table 5Aand 5C Amino Acid Sequence (Light Chain) of Variant 203 SEQ ID NO: 96found in Table 5A and 5C Amino Acid Sequence (Light Chain) of Variant204 SEQ ID NO: 97 found in Table 5A and 5C Amino Acid Sequence (LightChain) of Variant 205 SEQ ID NO: 98 found in Table 5A and 5C Amino AcidSequence (Light Chain) of Variant 206 SEQ ID NO: 99 found in Table 5Aand 5C Amino Acid Sequence (Light Chain) of Variant 207 SEQ ID NO: 100found in Table 5A and 5C Amino Acid Sequence (Light Chain) of Variant208 SEQ ID NO: 101 found in Table 5A and 5C Amino Acid Sequence (LightChain) of Variant 209 SEQ ID NO: 102 found in Table 5A and 5C Amino AcidSequence (Light Chain) of Variant 212 SEQ ID NO: 103 found in Table 5Aand 5C Amino Acid Sequence (Light Chain) of Variant 213 SEQ ID NO: 104found in Table 5A and 5C Amino Acid Sequence (Light Chain) of Variant214 SEQ ID NO: 105 found in Table 5A and 5C Amino Acid Sequence (LightChain) of Variant 215 SEQ ID NO: 106 found in Table 5A and 5C Amino AcidSequence (Light Chain) of Variant 216 SEQ ID NO: 107 found in Table 5Aand 5C Amino Acid Sequence (Light Chain) of Variant 217 SEQ ID NO: 108found in Table 5A and 5C Amino Acid Sequence (Light Chain) of Variant218 SEQ ID NO: 109 found in Table 5A and 5C Amino Acid Sequence (LightChain) of Variant 219 SEQ ID NO: 110 found in Table 5 A and 5C AminoAcid Sequence (Light Chain) of Variant 220 SEQ ID NO: 111 found in Table5A and 5C Amino Acid Sequence (Heavy Chain) of Variant 201 SEQ ID NO: 18found in Table 5B and 5D Amino Acid Sequence (Heavy Chain) Variant 202SEQ ID NO: 112 found in Table 5B and 5D Amino Acid Sequence (HeavyChain) Variant 203 SEQ ID NO: 113 found in Table 5B and 5D Amino AcidSequence (Heavy Chain) Variant 204 SEQ ID NO: 114 found in Table 5B and5D Amino Acid Sequence (Heavy Chain) Variant 205 SEQ ID NO: 115 found inTable 5B and 5D Amino Acid Sequence (Heavy Chain) Variant 206 SEQ ID NO:116 found in Table 5B and 5D Amino Acid Sequence (Heavy Chain) Variant207 SEQ ID NO: 117 found in Table 5B and 5D Amino Acid Sequence (HeavyChain) Variant 208 SEQ ID NO: 118 found in Table 5B and 5D Amino AcidSequence (Heavy Chain) Variant 209 SEQ ID NO: 119 found in Table 5B and5D Amino Acid Sequence (Heavy Chain) Variant 212 SEQ ID NO: 120 found inTable 5B and 5D Amino Acid Sequence (Heavy Chain) Variant 213 SEQ ID NO:121 found in Table 5B and 5D Amino Acid Sequence (Heavy Chain) Variant214 SEQ ID NO: 122 found in Table 5B and 5D Amino Acid Sequence (HeavyChain) Variant 215 SEQ ID NO: 123 found in Table 5B and 5D Amino AcidSequence (Heavy Chain) Variant 216 SEQ ID NO: 124 found in Table 5B and5D Amino Acid Sequence (Heavy Chain) Variant 217 SEQ ID NO: 125 found inTable 5B and 5D Amino Acid Sequence (Heavy Chain) Variant 218 SEQ ID NO:126 found in Table 5B and 5D Amino Acid Sequence (Heavy Chain) Variant219 SEQ ID NO: 127 found in Table 5B and 5D Amino Acid Sequence (HeavyChain) Variant 220 SEQ ID NO: 128 found in Table 5B and 5D Kabat CDRL1found in 5C SEQ ID NO; 189 Kabat CDRL1 found in 5C SEQ ID NO: 190 KabatCDRL1 found in 5C SEQ ID NO: 191 Kabat CDRL1 found in 5C SEQ ID NO: 192Kabat CDRL1 found in 5C SEQ ID NO: 193 Kabat CDRL1 found in 5C SEQ IDNO: 194 Kabat CDRL1 found in 5C SEQ ID NO: 195 Kabat CDRL2 found in 5CSEQ ID NO: 196 Kabat CDRL2 found in 5C SEQ ID NO: 197 Kabat CDRL2 foundin 5C SEQ ID NO: 198 Kabat CDRL2 found in 5C SEQ ID NO: 199 Kabat CDRL2found in SC SEQ ID NO: 200 Kabat CDRL2 found in 5C SEQ ID NO: 201 KabatCDRL3 found in 5C SEQ ID NO: 202 Kabat CDRH1 found in 5D SEQ ID NO: 203Kabat CDRH1 found in 5D SEQ ID NO: 204 Kabat CDRH1 found in 5D SEQ IDNO: 205 Kabat CDRH1 found in 5D SEQ ID NO: 206 Kabat CDRH1 found in 5DSEQ ID NO: 207 Kabat CDRH2 found in 5D SEQ ID NO: 208 Kabat CDRH3 foundin 5D SEQ ID NO: 209

Example 4

Formulation 1 comprises the following excipients. Polysorbate 20 at0.03%, sucrose at 5%, sodium chloride at 40 mM, phosphate buffer at 10mM, and pH at 5.8. In alternate embodiments Polysorbate 20 may be usedat a range of about 0.1% to 0.04%. Further, sucrose may be used at arange of about 1% to about 20%. Sodium chloride may be used at a rangeof about 10 to about 80 mM. Phosphate buffer may be used at a range ofabout 10 to about 100 mM. Also, the pH may be at a range of about 5 to6.

Formulation 2 comprises the following excipients. Polysorbate 20 at0.03%, sucrose at 0.05%, sodium chloride at 40 mM, histidine buffer at10 mM, and pH at 5.5. In alternate embodiments Polysorbate 20 may beused at a range of about 1% to about 20%. Further, sucrose may be usedat a range of about 1% to about 20%. Sodium chloride may be used at arange of about 10 to about 80 mM. Histidine buffer may be used at arange of about 5 to about 50 mM. Also, the pi may be at a range of about5 to 5.5.

Formulation 3 comprises the following excipients. Polysorbate 20 at0.03%, sucrose at 0.05%, sodium chloride at 40 mM, sodium citrate bufferat 10 mM, and pH at 5. In alternate embodiments Polysorbate 20 may beused at a range of about 0.1% to 0.04%. Further, sucrose may be used ata range of about 1% to about 20%. Sodium chloride may be used at a rangeof about 10 to about 80 mM. Sodium citrate buffer may be used at a rangeof about 5 to about 20 mM. Also, the pH may be at a range of about 5 to5.5.

Example 5

Variant 201 Biochemical Description

Variant 201 is a Fab antibody comprising human anti-VEGF variable domainshown in FIGS. 23 and 24 and is initially produced as a fusion protein(SEQ ID NO: 16) before being processed to remove the 23 amino-terminalsecretory signal to produce the mature Fab 201 antibody fragment, withthe heavy chain variable region-CH 1 domain and part of a hinge regionprovided in FIG. 23 and the kappa light chain variable region-kappalight chain constant region provided in FIG. 24. Compared to other knownanti-VEGF antibodies, like Lucentis, the variable domain of variant 201contains multiple mutations (FIGS. 23 and 24), especially in the CDRs asdefined either by Kabat nomenclature or IMGT® nomenclature. Thesemutations confer stronger binding of variant 201 to VEGF (FIG. 3).

Example 6

Upstream Process Information for Synthetic Antibodies Against VEGF

Transformation of Anti-VEGF Fab-201 Construct in E. coli BL21 by KCMMethod

The anti-VEGF Fab DNA construct was mixed with 10 μl of 1×KCM andprechilled on ice for 2-5 mins before adding the same volume ofcompetent cells (10 ul). Tube was further incubated on ice for 20 mins,and then incubated at room temperature for 10 mins. 200 ul of SuperOptimal Broth with Catabolite Repression (SOC) was added and the cellsare incubated in orbital shaker 37° C. for 1 hour. 100 μl of aboveculture was plated in LB agar plate with adequate antibiotic(Carbenicillin), incubated the plate at 37° C. for 14 hours.

Expression of Anti-VEGF Fab-201 in the Shake Flask Culture

Pre-Inoculum Preparation:

Inoculated 10 μl from frozen working cell bank of E. coli BL21-201 in 10ml sterile LB broth containing carbenicillin antibiotic (10 μl from 100mg/ml stock). Incubated the culture in orbital shaker at 37° C. at 210rpm for 16 hours (overnight).

Growth and Induction in Minimal Medium:

Prepared the minimal salt medium for growth and production as mentionedin Table 5. pH of the medium was adjusted to 7.0±0.3. The growth andproduction medium was autoclaved at 121° C. at 15 psi for 15 min.

Before inoculation, 500 μL carbenicillin (from 100 mg/mL stocks), 500 μLThiamine HCL (from 1 M sterile stocks), 2.5 mL sterile glucose (from 40%sterile stocks) and 320 μL potassium phosphate (from 1M KH2PO4) wasadded. 8% of overnight grown culture (Pre-inoculum) was transferred toGrowth medium. Initial OD (at 600 nm), Glucose concentration andPhosphate concentration of the culture were measured in the Growthmedium.

The culture flask was incubated at 37° C., 210 rpm for 7-8 hours (tillthe OD reached in between 2-2.5). The OD (at 600 nm), Glucoseconcentration and Phosphate concentration of the culture was checked inthe Growth medium after 8 hours of growth. Spun the culture at 4000 rpm,+30° C. for 15 mins. The cell pellet was washed with minimal medium(without phosphate) and spun it again at 4000 rpm for 15 mins. Thesupernatant was drained slowly. Suspended the cell pellet in 500 mLProduction medium with low phosphate concentration. The culture flaskwas incubated at 30° C., 210 rpm for 16 hours. OD (at 600 nm), Glucoseconcentration and Phosphate concentration of the harvest culture waschecked. The expressed culture was spun at 4300 G, +4° C. for 30 mins.Anti-VEGF Fab expression was checked by SDS-PAGE and quantified theexpression level by ELISA.

Expression of Anti-VEGF Fab-201 in 2.5 L Fermentation Salt Medium

Expression in 2.5 L Fermenter:

Anti-VEGF antibody was produced in large scale using fermentationprocess in 3.7 L fermenter.

Inoculum Preparation:

For each 2.5 L fermentation, inoculated 20 μl of frozen working cellbank of E. coli BL21-201 in 250 ml sterile LB broth containingcarbenicillin antibiotic (250 μl from 100 mg/ml stock). The cultureflask was incubated in orbital shaker at 37° C. at 210 rpm for 16 hours(overnight).

High Cell Density Fermentation in Minimal Salt Medium:

The minimal salt medium for 2.5 L fermentation culture was prepared.Adjusted the medium pH to 7.0±0.3 by Ammonium hydroxide (25%). Theminimal salt medium was sterilized in 3.7 L fermenter at 121° C. at 15psi for 20 mins.

Before inoculation, 2.5 mL carbenicillin (from 100 mg/mL stocks), 2.5 mLThiamine HCL (from 1 M sterile stocks), 2.5 mL trace elements, 300 μlL-61 antifoam, and 100 mL sterile glucose solution (containing 40 g ofglucose) were added. Calibrated and set the DO level to 100% beforeinoculum transfer. After Do calibration, transferred 10% (250 mL) ofovernight grown culture (Inoculum) in the fermenter medium. The initialOD (at 600 nm), Glucose concentration and Phosphate concentration of theculture in the fermentation medium were checked.

Fermentation was performed at 37° C. at 3 lpm of air flow and wascontrolled at a pH of 7.0±0.3 by ammonium hydroxide (25%). The backpressure of the fermenter was maintained at 0.5 bar gauge and theagitation rate was set to 500 rpm. Maintained the minimum DO level to30% during the fermentation by increasing agitation from 500 to 1200 rpm(agitation was increased in a gradual manner), and by keeping the backpressure in the fermenter. The Culture OD (at 600 nm) reached to 18±2 in12 hours, at this point the computer-based feeding was started toachieve the high cell density culture. The concentrated feed containedglucose (450 g), 25 ml of 1 M magnesium sulphate, 25 ml of 20× saltmedium and 50 ml of 1M potassium phosphate. The concentrated feed wasadded to the fermenter and started at a flow rate of 1 ml/min for 18hours. When the fermenter culture reached the OD (at 600 nm) around120±10, in-parallel the phosphate concentration was measured. At 21f2hours the phosphate concentration in the fermentation culture was below0.05 mM, at this point the fermentation temperature was graduallychanged from 37° C. to 30° C. The Induction was started, when thephosphate concentration in the fermentation culture was below than 0.05mM. The post induction was carried out for 10 hours at 30° C. and 1200rpm. Minimum dissolved oxygen level (30%) was maintained for high celldensity culture with the addition of pure oxygen. The mixture of air andpure oxygen was pumped at the flow of 4 lpm at 30° C. to maintained thedissolved oxygen set point. OD (at 600 nm), Glucose concentration andPhosphate concentration of the fermentation culture were measured afterinduction. Spun the culture at 4300 G, +4° C. for 30 mins and discardedthe supernatant. The anti-VEGF Fab-201 purifications were performed andexpression was checked by SDS-PAGE and quantified by ELISA.

Fermentation data and expression yield are shown in FIG. 21.

Example 7

Downstream Process Information for Synthetic Antibodies Against VEGF

Cell Pellet Suspension and Lysis:

Lysis of E. coli cell pellet was carried out using lysis buffer (LysisBuffer—200 mM Phosphate buffer, pH 7.4, 400 mM Sodium Chloride, 10 mMPhenyl Methane Sulfonyl Fluoride (PMSF), 2 mM EDTA, 5% Sucrose, 1%Triton X-100. About 446 grams of wet weight of cell pellet was suspendedin 4.0 L of lysis buffer (approx. at 1:10 ratio) at room temperature andthe cell pellet was mixed vigorously until a homogeneous cell suspensionis obtained. Since the pellet was taken from −80° C. and lysis performedat room temperature, due to extreme temperature difference and highbuffer strength coupled with salt concentration results in the formationof osmotic shock on the bacterial cell wall making it highly porous forfree flow of molecules from periplasmic region. This method is notsufficient to release the proteins and requires further treatment withhigh pressure homogenizer.

The cell paste so obtained was passed through GEA-homogenizer for threecontinuous passes at 800 bar pressure at 4° C. temperature. Microscopicexamination was carried out after each pass to make sure about completelysis has happened.

Heating and Centrifugation:

The homogenized lysate was heated at 65° C. for an hour in waterbath andthen, chilled on ice for 20 minutes. The chilled lysate was clarified bycentrifuging at 17,000 g for 30 minutes under 4° C. Further, theclarified lysate was concentrated by 6 times the initial volume of thelysate using 10 KDa by Tangential Flow Filtration.

Step 1 Purification by Capto-L:

A volume of 20 ml of GE Capto L was packed in XK16/20 column wasequilibrated with 0.2 M sodium phosphate, pH 7.4, containing 0.4M sodiumchloride. The concentrated lysate was loaded at flowrate of 4 mL/minuteand washed with the equilibration buffer. Saksin Fab-201 was elutedusing buffer containing 0.2 M glycine-Cl/2% sucrose, pH 2.0 andcollected eluate was immediately neutralized with 1.5 M Tris-Cl, pH 8.8.

Step 2 Purification by Q-Sepharose:

The first elution from capto-L chromatography was dialysed against 20 mMsodium phosphate buffer, at pH 7.3 and polished using 10 mL of anionexchange resin GE Q sepharose in order to remove endotoxins and HCDNAs.The purified fab was collected as flowthrough.

Step 3 Purification by SP-Sepharose:

The flowthrough from Q-sepharose was loaded onto 15 mL of cationexchange GE SP sepharose resin packed in XK26/20. Resin was washed withslightly increased conductivity, and eluation of bound proteinsincluding Fab was carried out by gradient eluation at a conductivity of14-16 mS/cm. Tightly bound proteins were eluated with 1 M sodiumchloride with buffer. The drug substance was dialysed against 20 mM PBpH-5.6 and sterile (0.22 μm) filtered finally.

Example 8

Stability of Formulated Fab 201 as a Drug

Drug substance Fab 201, was subjected to formulation (Drug product) toincrease the stability characteristics to facilitate intravitrealinjections for wet AMD. The drug product DP_201 was formulated in aconcentration range between 5 to 10 mg/ml. In addition to the API, theformulation contains in 10 mM phosphate buffer/40 mM NaCl/0.03%polysorbate 20/5% sucrose solution at pH 5.8. The osmolarity of theformulation is approx. 276 mOsm, comparable to human intra-vitrealfluid.

The stability was analysed with respect to quantitative ELISA and SDSPAGE. The data suggests that the Drug product is stable for 8 months(240 days) at 4° C., as depicted in FIG. 22.

Example 9

Anti-Angiogenic Chronic Study in Rabbit Eye A study was conducted toevaluate efficacy and sustainability of an anti VEGF (VascularEndothelial Growth Factor) Fab (Fragment Antigen Binding) protein (TestMolecule #201) discovered by Saksin Lifesciences Pvt. Ltd., TICELBio-Park Facility, Taramani, Chennai, India in the VEGF induced retinalleakage model rabbits (Dutch Belted, 3-4 months old males, bodyweight—1.0-1.3 kg) compared to commercially available Lucentis. Thestudy was conducted at PharmOptima, LLC, Portage Mich., USA. Groups ofthe rabbits were treated with test Molecule #201 (150 μg in 50 μLFormulation buffer), Lucentis (150 μg in 50 μL Formulation buffer), orVehicle (50 μL Formulation buffer) on Day 0 by intravitrealadministration (IVT). Animals from each group then received VEGFchallenge on Days 7, 21 or 37 by IVT to determine whether the efficacywas sustained over time.

Prior to IVT administrations (Test Molecule #201, Lucentis, Vehicle orVEGF), the rabbit was anaesthetized with Isoflurane vapors to effect.Prior to injection, each eye was moistened with an ophthalmic Betadinesolution and rinsed. Proparacaine (0.5%) was applied to the ocularsurface, the eye was held open with an eye speculum and the pars planawas marked ˜4.0 mm from the limbus with calipers. The test Molecule wasthen delivered through the pars plana into the mid vitreous at an angleto avoid the lens.

Fluorescein Angiograms (FAs) were conducted on all animals on 3rd dayafter VEGF challenge. Eyes were anesthetized with proparacaine andpupils dilated with tropicamide and EyePrim. Animals were anesthetizedwith isoflurane vapors to effect, and 0.1 mL of 10% ophthalmic sodiumfluorescein was administered in the rabbit ear vein and allowed tocirculate for at least 2 minutes prior to imaging. Images were gradedusing a standard scoring system given below (Table 6):

TABLE 6 Scoring System for Fluorescein Imaging Score Description 0 Majorvessels very straight, with some tortuosity of smaller vessels 1Increased tortuosity of major vessels and or vessel dilation 2 Leakagebetween major vessels 3 Leakage between major and minor vessels. Minorvessels still visible. 4 Leakage between major and minor vessels. Minorvessels not visible.

Following terminal FAs, animals were euthanized by intravenousbarbiturate overdose. Eyes were harvested and vitreous, aqueous humorand retina was collected. All samples were stored at −80° C. for furtheranalysis.

Scores of both the eyes were subjected to Kruskal-Wallis one way ANOVAto find the significant difference among the Groups. Data showingsignificant difference were subjected to Dunn's test for determiningsignificant difference between the Groups.

VEGF challenge 1 week after test Molecule #201 administration resultedin the expected amount of leakage in the vehicle injected group and fullprotection from both Lucentis and Test Molecule #201. VEGF challenge 3weeks after Test Molecule #201 administration resulted in the expectedamount of leakage in the vehicle treated group, and a significantlygreater protection in the Test Molecule #201 treated rabbits than thatof Lucentis treated rabbits. VEGF challenge 5 weeks after test Molecule#201 administration resulted in the expected amount of leakage in thevehicle injected group, but no protection from both Lucentis and testMolecule #201 (Table 7).

TABLE 7 Fluorescein Imaging Scores of VEGF Challenged Rabbits after 1, 3and 5 Weeks Test Molecule Administration Treatment Week 1 Week 3 Week 5Test Molecule #201 0.17 ± 0.39^(a) 1.25 ± 0.89^(a) 3.25 ± 0.45^(a)Lucentis 0.00 ± 0.00^(a) 2.88 ± 0.35^(b) 3.08 ± 0.51^(a) Vehicle 3.50 ±0.47^(b) 3.67 ± 0.49^(c) 3.50 ± 0.52^(a)

Values are expressed as mean±SD. Values showing similar superscripts inany single column are statistically the same (Dunn's test).

CONCLUSION

From the study, it may be concluded that sustainability of efficacy ofTest Molecule #201 was significantly greater than that of Lucentis inthe VEGF-induced retinal leakage model rabbits, following VEGF challenge3 weeks after test Molecule #201 administration. The molecular basis forthis efficacy may be attributable to the differences in the CDRs of Fab201 compared to Lucentis as shown in FIGS. 23 and 24.

1. An isolated anti-VEGF antibody or portion or variant thereof thatspecifically recognizes and binds a VEGF comprising a heavy chainvariable domain comprising the following hypervariable region orcomplementarity determining region (CDR) amino acid sequences: CDRH1comprising histidine at amino acid position 31 to histidine at aminoacid position 35 (SEQ ID NO: 1), CDRH2 comprising tyrosine at amino acidposition 50 to glycine at amino acid position 66 (SEQ ID NO: 1) andCDRH3 comprising histidine at amino acid position 99 to tyrosine atamino acid position 109 (SEQ ID NO: 1). 2.-19. (canceled)
 20. Theanti-VEGF antibody of claim 1 which is a full length antibody.
 21. Theanti-VEGF antibody of claim 20, wherein the full length antibodycomprises a light chain comprising the amino acid sequence shown in SEQID NO:3 and a heavy chain shown in SEQ ID NO:1, a light chain comprisingthe aspartic acid at amino acid position 24 to cysteine at amino acidposition 237 (SEQ ID NO:17) and a heavy chain comprising the glutamicacid at amino acid position 24 to threonine at amino acid position 251(SEQ ID NO:18), or a light chain comprising the aspartic acid at aminoacid position 24 to cysteine at amino acid position 237 (SEQ ID NO:76)and a heavy chain comprising the glutamic acid at amino acid position 24to threonine at amino acid position 251 (SEQ ID NO:78).
 22. Theanti-VEGF antibody of claim 1 which is human or humanized.
 23. Theanti-VEGF antibody of claim 1 wherein the portion of the antibody is anantibody fragment.
 24. The anti-VEGF antibody of claim 23, wherein theantibody fragment is a Fab.
 25. (canceled)
 26. The anti-VEGF antibody ofclaim 24, wherein the Fab is joined to a Fc region. 27.-28. (canceled)29. The anti-VEGF antibody of claim 1, wherein the variant is a scFv.30.-49. (canceled)
 50. A bispecific antibody with a binding specificityfor two different antigens, one of the antigens being that with whichthe antibody of claim 1 binds and wherein the bispecific antibodycomprises an amino acid sequence comprising the amino acid sequence forCDRH1 of claim 1 or a portion thereof, CDRH2 of claim 1 or a portionthereof, CDRH3 of claim 1 or a portion thereof, CDRL1 of claim 2 or aportion thereof, CDRL2 of claim 2 or a portion thereof, or CDRL3 ofclaim 2 or a portion thereof, or a combination thereof. 51.-52.(canceled)
 53. The anti-VEGF antibody of claim 1 which is a monoclonalantibody, a chimeric antibody, a humanized antibody, a human antibody, asynthetic antibody, a single chain antibody or an antigen-bindingfragment thereof. 54.-59. (canceled)
 60. A composition comprising theanti-VEGF antibody of claim 1 and a pharmaceutically acceptable carrier.61. (canceled)
 62. An isolated nucleic acid encoding the antibody ofclaim
 1. 63. A vector comprising the nucleic acid of claim
 62. 64. Ahost cell comprising the vector of claim
 63. 65. A process of producingan anti-VEGF antibody comprising culturing the host cell of claim 64 sothat the nucleic acid is expressed to produce the antibody. 66.(canceled) 67.-123. (canceled)
 124. A method for inhibiting VEGF-inducedangiogenesis in a mammal comprising administering a therapeuticallyeffective amount of the anti-VEGF antibody of claim an isolatedanti-VEGF antibody or portion or variant thereof that specificallyrecognizes and binds a VEGF comprising a heavy chain variable domaincomprising the following hypervariable region or complementaritydetermining region (CDR) amino acid sequences: CDRH1 comprisinghistidine at amino acid position 31 to histidine at amino acid position35 (SEQ ID NO: 1), CDRH2 comprising tyrosine at amino acid position 50to glycine at amino acid position 66 (SEQ ID NO: 1) and CDRH3 comprisinghistidine at amino acid position 99 to tyrosine at amino acid position109 (SEQ ID NO: 1) to the mammal.
 125. (canceled)
 126. The method ofclaim 124, wherein the mammal has a disease selected from retinaldisorder, wet age-related macular degeneration, diabetic maculopathy,proliferative diabetic retinopathy, macular edema in retinal veinocclusion (RVO), iris neovascularization, choroidal neovascularizationcaused by pathological myopia, retinopathy of prematurity (ROP),retinopathy of maturity, neovascular glaucoma, and cancer.
 127. Themethod of claim 126, wherein the retinal disorder is associated withpoor vision at night (night blindness), trouble adjusting from brightlylit to dim areas, sudden or unexplained loss of vision, loss ofperipheral vision, loss of vision in a particular visual field, a rapid,involuntary oscillatory motion of the eyeball (nystagmus), abnormalsensitivity to or intolerance of light (photophobia) or a combinationthereof.
 128. A method for inhibiting macular degeneration in a mammalcomprising administering a therapeutically effective amount of thehumanized anti-VEGF antibody of claim 1 to the mammal. 129.-134.(canceled)
 135. A method for inhibiting a cell proliferative disorder ina mammal comprising administering a therapeutically effective amount ofthe anti-VEGF antibody of claim 1 to the mammal
 136. (canceled)
 137. Themethod of claim 135, wherein the cell proliferative disorder is selectedfrom the group consisting of wet age related macular degeneration,diabetic maculopathy, proliferative diabetic retinopathy, macular edemain retinal vein occlusion (RVO), iris neovascularization, choroidalneovascularisation caused by pathological myopia, retinopathy ofmaturity, neovascular glaucoma, diabetic retinopathy, retinalneovascularization, pars plana vitrectomy (PPV), diabetic macular edema(DME) and cancer. 138.-143. (canceled)